Information for 3-RCAGGAAGCR (Motif 2)

C T G A T A G C C G T A A C T G A C T G C G T A C G T A C T A G A G T C T C G A
Reverse Opposite:
A G C T T C A G A G T C A C G T A C G T A G T C A G T C A C G T A T C G G A C T
p-value:1e-57
log p-value:-1.324e+02
Information Content per bp:1.748
Number of Target Sequences with motif174.0
Percentage of Target Sequences with motif23.64%
Number of Background Sequences with motif2690.5
Percentage of Background Sequences with motif5.69%
Average Position of motif in Targets50.2 +/- 25.2bp
Average Position of motif in Background50.5 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:1
Score:0.95
Offset:0
Orientation:forward strand
Alignment:RCAGGAAGCR
ACAGGAAGTG
 C T G A T A G C C G T A A C T G A C T G C G T A C G T A C T A G A G T C T C G A
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-RCAGGAAGCR
NACAGGAAAT-
 A C G T C T G A T A G C C G T A A C T G A C T G C G T A C G T A C T A G A G T C T C G A
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:3
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-RCAGGAAGCR-
NDCAGGAARTNN
 A C G T C T G A T A G C C G T A A C T G A C T G C G T A C G T A C T A G A G T C T C G A A C G T
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-RCAGGAAGCR
AACAGGAAGT-
 A C G T C T G A T A G C C G T A A C T G A C T G C G T A C G T A C T A G A G T C T C G A
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-RCAGGAAGCR
NACAGGAAAT-
 A C G T C T G A T A G C C G T A A C T G A C T G C G T A C G T A C T A G A G T C T C G A
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.89
Offset:0
Orientation:forward strand
Alignment:RCAGGAAGCR
ACAGGAAGTG
 C T G A T A G C C G T A A C T G A C T G C G T A C G T A C T A G A G T C T C G A
T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-RCAGGAAGCR
AVCAGGAAGT-
 A C G T C T G A T A G C C G T A A C T G A C T G C G T A C G T A C T A G A G T C T C G A
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-RCAGGAAGCR
ANCAGGAAGT-
 A C G T C T G A T A G C C G T A A C T G A C T G C G T A C G T A C T A G A G T C T C G A
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:9
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-RCAGGAAGCR
AACCGGAAGT-
 A C G T C T G A T A G C C G T A A C T G A C T G C G T A C G T A C T A G A G T C T C G A
T C G A C T G A T A G C T G A C T C A G T C A G C G T A C G T A T C A G A G C T A C G T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:RCAGGAAGCR
DCCGGAARYN
 C T G A T A G C C G T A A C T G A C T G C G T A C G T A C T A G A G T C T C G A
C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G