Information for 10-GAACTTCCCTTCACAA (Motif 8)

A T C G C G T A G T C A G A T C A C G T A G C T G T A C A G T C G T A C G A C T A C G T G T A C G T C A G A T C G T C A C G T A
Reverse Opposite:
G C A T C A G T C A T G C A G T C A T G C G T A C G T A A C T G C T A G C A T G C T G A C G T A C A T G A C G T A C G T A T G C
p-value:1e-11
log p-value:-2.580e+01
Information Content per bp:1.698
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif32.7
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets49.7 +/- 21.6bp
Average Position of motif in Background54.7 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAACTTCCCTTCACAA
GGAAATTCCC-------
 A C G T A T C G C G T A G T C A G A T C A C G T A G C T G T A C A G T C G T A C G A C T A C G T G T A C G T C A G A T C G T C A C G T A
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GAACTTCCCTTCACAA
NNACTTCCTCTTNN--
 A T C G C G T A G T C A G A T C A C G T A G C T G T A C A G T C G T A C G A C T A C G T G T A C G T C A G A T C G T C A C G T A
C A G T G C T A C T G A A T G C C G A T C G A T A G T C A G T C A C G T A G T C G C A T G C A T G C T A T C G A A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GAACTTCCCTTCACAA
NNACTTACCTN-----
 A T C G C G T A G T C A G A T C A C G T A G C T G T A C A G T C G T A C G A C T A C G T G T A C G T C A G A T C G T C A C G T A
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GAACTTCCCTTCACAA
NNACTTGCCTT-----
 A T C G C G T A G T C A G A T C A C G T A G C T G T A C A G T C G T A C G A C T A C G T G T A C G T C A G A T C G T C A C G T A
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GAACTTCCCTTCACAA
GGGAAATCCCCN------
 A C G T A C G T A T C G C G T A G T C A G A T C A C G T A G C T G T A C A G T C G T A C G A C T A C G T G T A C G T C A G A T C G T C A C G T A
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T A C G T A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAACTTCCCTTCACAA
GGAAATTCCC-------
 A C G T A T C G C G T A G T C A G A T C A C G T A G C T G T A C A G T C G T A C G A C T A C G T G T A C G T C A G A T C G T C A C G T A
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GAACTTCCCTTCACAA
-CACTTCCYCTTT---
 A T C G C G T A G T C A G A T C A C G T A G C T G T A C A G T C G T A C G A C T A C G T G T A C G T C A G A T C G T C A C G T A
A C G T T A G C T C G A A T G C A C G T A C G T A G T C A G T C A G C T G A T C G C A T G A C T G C A T A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GAACTTCCCTTCACAA
-CACTTCCTCT-----
 A T C G C G T A G T C A G A T C A C G T A G C T G T A C A G T C G T A C G A C T A C G T G T A C G T C A G A T C G T C A C G T A
A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T A C G T A C G T A C G T A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GAACTTCCCTTCACAA
---TTCCCCCTAC---
 A T C G C G T A G T C A G A T C A C G T A G C T G T A C A G T C G T A C G A C T A C G T G T A C G T C A G A T C G T C A C G T A
A C G T A C G T A C G T A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAACTTCCCTTCACAA
-ACTTTCACTTTC---
 A T C G C G T A G T C A G A T C A C G T A G C T G T A C A G T C G T A C G A C T A C G T G T A C G T C A G A T C G T C A C G T A
A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C A C G T A C G T A C G T