Information for 17-GCGCCAGGGC (Motif 31)

C A T G A G T C C T A G A T G C A T G C T C G A A C T G C A T G A T C G A T G C
Reverse Opposite:
A T C G A T G C G T A C A G T C A G C T T A C G A T C G A G T C A C T G G T A C
p-value:1e-6
log p-value:-1.433e+01
Information Content per bp:1.730
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 36.3bp
Average Position of motif in Background60.8 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------GCGCCAGGGC-
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C C T A G A T G C A T G C T C G A A C T G C A T G A T C G A T G C A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCGCCAGGGC--
GCCTCAGGGCAT
 C A T G A G T C C T A G A T G C A T G C T C G A A C T G C A T G A T C G A T G C A C G T A C G T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCGCCAGGGC--
TTGCCCTAGGGCAT
 A C G T A C G T C A T G A G T C C T A G A T G C A T G C T C G A A C T G C A T G A T C G A T G C A C G T A C G T
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

PB0112.1_E2F2_2/Jaspar

Match Rank:4
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------GCGCCAGGGC-
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C C T A G A T G C A T G C T C G A A C T G C A T G A T C G A T G C A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

TFAP2C/MA0524.2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCGCCAGGGC-
TGCCCCAGGGCA
 A C G T C A T G A G T C C T A G A T G C A T G C T C G A A C T G C A T G A T C G A T G C A C G T
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A

TFAP2B/MA0811.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCGCCAGGGC-
TGCCCCAGGGCA
 A C G T C A T G A G T C C T A G A T G C A T G C T C G A A C T G C A T G A T C G A T G C A C G T
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A

NRF1/MA0506.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCGCCAGGGC-
GCGCCTGCGCA
 C A T G A G T C C T A G A T G C A T G C T C G A A C T G C A T G A T C G A T G C A C G T
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCGCCAGGGC--
SCCTSAGGSCAW
 C A T G A G T C C T A G A T G C A T G C T C G A A C T G C A T G A T C G A T G C A C G T A C G T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCGCCAGGGC-
TGCCCCCGGGCA
 A C G T C A T G A G T C C T A G A T G C A T G C T C G A A C T G C A T G A T C G A T G C A C G T
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCGCCAGGGC-
GTCCCCAGGGGA
 A C G T C A T G A G T C C T A G A T G C A T G C T C G A A C T G C A T G A T C G A T G C A C G T
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A