Information for 16-GGTAATCAGC (Motif 30)

A T C G T A C G A C G T C G T A C T G A A G C T A G T C C T G A A C T G A T G C
Reverse Opposite:
A T C G A G T C A G C T A C T G C T G A A G C T C G A T C G T A A T G C T A G C
p-value:1e-7
log p-value:-1.673e+01
Information Content per bp:1.776
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif21.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets43.9 +/- 20.8bp
Average Position of motif in Background56.1 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EVX1/MA0887.1/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GGTAATCAGC
GNTAATTANN
 A T C G T A C G A C G T C G T A C T G A A G C T A G T C C T G A A C T G A T G C
A T C G T A G C G A C T C T G A T G C A A G C T A G C T C T G A A T G C A G T C

EVX2/MA0888.1/Jaspar

Match Rank:2
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GGTAATCAGC
NNTAATTANN
 A T C G T A C G A C G T C G T A C T G A A G C T A G T C C T G A A C T G A T G C
T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GGTAATCAGC-
-NTAATGAGCT
 A T C G T A C G A C G T C G T A C T G A A G C T A G T C C T G A A C T G A T G C A C G T
A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

PH0032.1_Evx2/Jaspar

Match Rank:4
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GGTAATCAGC----
ANCGCTAATTAGCGGTN
 A C G T A C G T A C G T A T C G T A C G A C G T C G T A C T G A A G C T A G T C C T G A A C T G A T G C A C G T A C G T A C G T A C G T
C G T A T G A C T G A C T A C G T A G C A G C T T G C A C G T A A C G T A C G T C T G A T A C G A G T C C A T G C T A G A C G T T C A G

PH0097.1_Lhx6_2/Jaspar

Match Rank:5
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GGTAATCAGC----
TCCACTAATTAGCGGTT
 A C G T A C G T A C G T A T C G T A C G A C G T C G T A C T G A A G C T A G T C C T G A A C T G A T G C A C G T A C G T A C G T A C G T
G C A T T G A C G A T C T C G A G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G T C C A T G C T A G C G A T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:6
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GGTAATCAGC
-TTAATCCG-
 A T C G T A C G A C G T C G T A C T G A A G C T A G T C C T G A A C T G A T G C
A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T

PH0098.1_Lhx8/Jaspar

Match Rank:7
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GGTAATCAGC----
ACCCCTAATTAGCGGTG
 A C G T A C G T A C G T A T C G T A C G A C G T C G T A C T G A A G C T A G T C C T G A A C T G A T G C A C G T A C G T A C G T A C G T
G C T A T G A C T G A C T G A C T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A G T C C A T G C A T G A C G T C T A G

LHX6/MA0658.1/Jaspar

Match Rank:8
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GGTAATCAGC
ACTAATTAGC
 A T C G T A C G A C G T C G T A C T G A A G C T A G T C C T G A A C T G A T G C
T C G A A G T C A G C T T C G A G T C A A G C T A G C T C T G A T C A G A G T C

BSX/MA0876.1/Jaspar

Match Rank:9
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GGTAATCAGC
-NTAATTGG-
 A T C G T A C G A C G T C G T A C T G A A G C T A G T C C T G A A C T G A T G C
A C G T A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:10
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GGTAATCAGC----
GACGATAATGAGCTTGC
 A C G T A C G T A C G T A T C G T A C G A C G T C G T A C T G A A G C T A G T C C T G A A C T G A T G C A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C