Information for 20-GGTGGGCTCTGGCCAT (Motif 27)

C A T G A C T G C G A T A C T G A C T G A C T G A T G C C G A T G T A C A C G T A C T G C T A G T G A C A T G C C G T A A C G T
Reverse Opposite:
G T C A A C G T A T C G A C T G A G T C A G T C C G T A A C T G G C T A A T C G A G T C A G T C A G T C C G T A A G T C G T A C
p-value:1e-8
log p-value:-1.989e+01
Information Content per bp:1.803
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.8 +/- 25.8bp
Average Position of motif in Background91.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGTGGGCTCTGGCCAT--
---GGGCGATGACCAYTC
 C A T G A C T G C G A T A C T G A C T G A C T G A T G C C G A T G T A C A C G T A C T G C T A G T G A C A T G C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A C G T C A G A G T C A C T G T G C A A G C T A C T G G T C A G T A C G A T C C T G A A G T C A C G T A T G C

PB0167.1_Sox13_2/Jaspar

Match Rank:2
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------GGTGGGCTCTGGCCAT
GTATTGGGTGGGTAATT-----
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C T G C G A T A C T G A C T G A C T G A T G C C G A T G T A C A C G T A C T G C T A G T G A C A T G C C G T A A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T A C G T A C G T A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGTGGGCTCTGGCCAT
-NAGGTCANTGACCT-
 C A T G A C T G C G A T A C T G A C T G A C T G A T G C C G A T G T A C A C G T A C T G C T A G T G A C A T G C C G T A A C G T
A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:4
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----GGTGGGCTCTGGCCAT
NATNGGGNGGGGANAN-----
 A C G T A C G T A C G T A C G T A C G T C A T G A C T G C G A T A C T G A C T G A C T G A T G C C G A T G T A C A C G T A C T G C T A G T G A C A T G C C G T A A C G T
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GGTGGGCTCTGGCCAT--
--TGGACTTTGNNCTNTG
 C A T G A C T G C G A T A C T G A C T G A C T G A T G C C G A T G T A C A C G T A C T G C T A G T G A C A T G C C G T A A C G T A C G T A C G T
A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GGTGGGCTCTGGCCAT
--GGGGGTGTGTCC--
 C A T G A C T G C G A T A C T G A C T G A C T G A T G C C G A T G T A C A C G T A C T G C T A G T G A C A T G C C G T A A C G T
A C G T A C G T T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGTGGGCTCTGGCCAT
NGTGGGCAT-------
 C A T G A C T G C G A T A C T G A C T G A C T G A T G C C G A T G T A C A C G T A C T G C T A G T G A C A T G C C G T A A C G T
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GGTGGGCTCTGGCCAT
-TAGGGCAAAGGTCA-
 C A T G A C T G C G A T A C T G A C T G A C T G A T G C C G A T G T A C A C G T A C T G C T A G T G A C A T G C C G T A A C G T
A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

PB0097.1_Zfp281_1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGTGGGCTCTGGCCAT
GGGGGGGGGGGGGGA-
 C A T G A C T G C G A T A C T G A C T G A C T G A T G C C G A T G T A C A C G T A C T G C T A G T G A C A T G C C G T A A C G T
A C T G C T A G C A T G C A T G A C T G C A T G C A T G C T A G C T A G C A T G A T C G C A T G C A T G T C A G G C T A A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GGTGGGCTCTGGCCAT
NTNTGGGGGGTCNNNA---
 A C G T A C G T A C G T C A T G A C T G C G A T A C T G A C T G A C T G A T G C C G A T G T A C A C G T A C T G C T A G T G A C A T G C C G T A A C G T
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A A C G T A C G T A C G T