Information for 18-CMYTGYAGGRMRYAGS (Motif 22)

A G T C G T A C A G T C A C G T A C T G A G C T C G T A A C T G C T A G C T A G G T C A C T A G A G T C C G T A A C T G T A C G
Reverse Opposite:
A T G C A G T C A C G T C T A G A G T C C A G T A G T C A G T C A G T C A C G T T C G A A G T C C G T A C T A G A C T G A C T G
p-value:1e-8
log p-value:-2.021e+01
Information Content per bp:1.803
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.0 +/- 21.8bp
Average Position of motif in Background8.6 +/- 0.9bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CMYTGYAGGRMRYAGS
CACAGCAGGGGG----
 A G T C G T A C A G T C A C G T A C T G A G C T C G T A A C T G C T A G C T A G G T C A C T A G A G T C C G T A A C T G T A C G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CMYTGYAGGRMRYAGS
DCHCAGCAGGRGGCC--
 A C G T A G T C G T A C A G T C A C G T A C T G A G C T C G T A A C T G C T A G C T A G G T C A C T A G A G T C C G T A A C T G T A C G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CMYTGYAGGRMRYAGS--
------AGGAAACAGCTG
 A G T C G T A C A G T C A C G T A C T G A G C T C G T A A C T G C T A G C T A G G T C A C T A G A G T C C G T A A C T G T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

Bcl6/MA0463.1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CMYTGYAGGRMRYAGS
NGCTTTCTAGGAAN----
 A C G T A C G T A G T C G T A C A G T C A C G T A C T G A G C T C G T A A C T G C T A G C T A G G T C A C T A G A G T C C G T A A C T G T A C G
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CMYTGYAGGRMRYAGS
CCACACAGCAGGAGA----
 A C G T A C G T A C G T A G T C G T A C A G T C A C G T A C T G A G C T C G T A A C T G C T A G C T A G G T C A C T A G A G T C C G T A A C T G T A C G
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CMYTGYAGGRMRYAGS
CCACACAGCAGGAGA----
 A C G T A C G T A C G T A G T C G T A C A G T C A C G T A C T G A G C T C G T A A C T G C T A G C T A G G T C A C T A G A G T C C G T A A C T G T A C G
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CMYTGYAGGRMRYAGS
GAGCACAGCAGGACA----
 A C G T A C G T A C G T A G T C G T A C A G T C A C G T A C T G A G C T C G T A A C T G C T A G C T A G G T C A C T A G A G T C C G T A A C T G T A C G
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CMYTGYAGGRMRYAGS
AATCGCACTGCATTCCG----
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G T C A C G T A C T G A G C T C G T A A C T G C T A G C T A G G T C A C T A G A G T C C G T A A C T G T A C G
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CMYTGYAGGRMRYAGS---
-----TAGGGCAAAGGTCA
 A G T C G T A C A G T C A C G T A C T G A G C T C G T A A C T G C T A G C T A G G T C A C T A G A G T C C G T A A C T G T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CMYTGYAGGRMRYAGS
----ACAGGAAGTG--
 A G T C G T A C A G T C A C G T A C T G A G C T C G T A A C T G C T A G C T A G G T C A C T A G A G T C C G T A A C T G T A C G
A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T