Information for 16-AGCAGTTKMTGMW (Motif 20)

C G T A A C T G A G T C G T C A C T A G A C G T A C G T A C T G G T A C A C G T A C T G G T C A C G A T
Reverse Opposite:
C G T A A C G T A G T C C G T A A C T G G T A C C G T A C G T A A G T C A C G T A C T G A G T C A C G T
p-value:1e-9
log p-value:-2.097e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.3 +/- 17.1bp
Average Position of motif in Background46.1 +/- 47.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----AGCAGTTKMTGMW
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C G T C A C T A G A C G T A C G T A C T G G T A C A C G T A C T G G T C A C G A T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGTTKMTGMW
BRRCVGTTDN----
 A C G T C G T A A C T G A G T C G T C A C T A G A C G T A C G T A C T G G T A C A C G T A C T G G T C A C G A T
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGCAGTTKMTGMW
AGCAGCTGCT---
 C G T A A C T G A G T C G T C A C T A G A C G T A C G T A C T G G T A C A C G T A C T G G T C A C G A T
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AGCAGTTKMTGMW
NNNTGGCAGTTGGTNN-
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C G T C A C T A G A C G T A C G T A C T G G T A C A C G T A C T G G T C A C G A T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AGCAGTTKMTGMW
CACGGCAGTTGGTNN-
 A C G T A C G T A C G T C G T A A C T G A G T C G T C A C T A G A C G T A C G T A C T G G T A C A C G T A C T G G T C A C G A T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGCAGTTKMTGMW
TGGCAGTTGG----
 A C G T C G T A A C T G A G T C G T C A C T A G A C G T A C G T A C T G G T A C A C G T A C T G G T C A C G A T
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T A C G T

Hmx1/MA0896.1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGCAGTTKMTGMW-
ACAAGCAATTAATGAAT
 A C G T A C G T A C G T C G T A A C T G A G T C G T C A C T A G A C G T A C G T A C T G G T A C A C G T A C T G G T C A C G A T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGCAGTTKMTGMW-
ACAAGCAATTAATGAAT
 A C G T A C G T A C G T C G T A A C T G A G T C G T C A C T A G A C G T A C G T A C T G G T A C A C G T A C T G G T C A C G A T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGCAGTTKMTGMW
AGCAGCTGCTNN-
 C G T A A C T G A G T C G T C A C T A G A C G T A C G T A C T G G T A C A C G T A C T G G T C A C G A T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGCAGTTKMTGMW
GGCVGTTR-----
 C G T A A C T G A G T C G T C A C T A G A C G T A C G T A C T G G T A C A C G T A C T G G T C A C G A T
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T A C G T A C G T A C G T