Information for 13-TCYAWRTATTTWG (Motif 16)

A C G T A G T C A G C T C G T A C G T A C T G A A C G T C G T A A C G T A C G T A C G T C G A T A C T G
Reverse Opposite:
A G T C C G A T C G T A C G T A C G T A A C G T C G T A A G C T C G A T A C G T C T G A A C T G C G T A
p-value:1e-9
log p-value:-2.223e+01
Information Content per bp:1.884
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.8 +/- 34.8bp
Average Position of motif in Background53.2 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCYAWRTATTTWG
NNTNNCAATATTAG-
 A C G T A C G T A C G T A G T C A G C T C G T A C G T A C T G A A C G T C G T A A C G T A C G T A C G T C G A T A C T G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCYAWRTATTTWG
NNTNNCAATATTAG-
 A C G T A C G T A C G T A G T C A G C T C G T A C G T A C T G A A C G T C G T A A C G T A C G T A C G T C G A T A C T G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCYAWRTATTTWG--
NATTTAAGTACTTANNA
 A C G T A C G T A C G T A G T C A G C T C G T A C G T A C T G A A C G T C G T A A C G T A C G T A C G T C G A T A C T G A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

PB0121.1_Foxj3_2/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TCYAWRTATTTWG-----
-NNCTTTGTTTTGNTNNN
 A C G T A G T C A G C T C G T A C G T A C T G A A C G T C G T A A C G T A C G T A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

VSX2/MA0726.1/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TCYAWRTATTTWG
-----NTAATTAG
 A C G T A G T C A G C T C G T A C G T A C T G A A C G T C G T A A C G T A C G T A C G T C G A T A C T G
A C G T A C G T A C G T A C G T A C G T T G A C G A C T C G T A C T G A A C G T C G A T C T G A T C A G

MF0010.1_Homeobox_class/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TCYAWRTATTTWG
---AATTATT---
 A C G T A G T C A G C T C G T A C G T A C T G A A C G T C G T A A C G T A C G T A C G T C G A T A C T G
A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T

PB0080.1_Tbp_1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TCYAWRTATTTWG-
NANTTATATATAANGN
 A C G T A C G T A C G T A G T C A G C T C G T A C G T A C T G A A C G T C G T A A C G T A C G T A C G T C G A T A C T G A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TCYAWRTATTTWG---
----KCTATTTTTRGH
 A C G T A G T C A G C T C G T A C G T A C T G A A C G T C G T A A C G T A C G T A C G T C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TCYAWRTATTTWG-----
---TTCTATTTTTAGNNN
 A C G T A G T C A G C T C G T A C G T A C T G A A C G T C G T A A C G T A C G T A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:10
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TCYAWRTATTTWG-
------TAATTAGN
 A C G T A G T C A G C T C G T A C G T A C T G A A C G T C G T A A C G T A C G T A C G T C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G T C A C G T A A C G T A C G T C T G A T C A G A T G C