Information for 5-GTCCATCTGCWGGCAG (Motif 6)

A C T G A G C T G A T C A T G C C G T A A C G T A G T C A C G T A T C G A G T C C G A T A C T G A C T G T A G C C T G A A C T G
Reverse Opposite:
A G T C A G C T A T C G A G T C A G T C C G T A A C T G A T G C C G T A A C T G G T C A C G A T A T C G C T A G C T G A G T A C
p-value:1e-16
log p-value:-3.850e+01
Information Content per bp:1.782
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.2 +/- 19.8bp
Average Position of motif in Background26.4 +/- 5.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:GTCCATCTGCWGGCAG
-------TNNGGGCAG
 A C T G A G C T G A T C A T G C C G T A A C G T A G T C A C G T A T C G A G T C C G A T A C T G A C T G T A G C C T G A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTCCATCTGCWGGCAG
--NCAGCTGCTG----
 A C T G A G C T G A T C A T G C C G T A A C G T A G T C A C G T A T C G A G T C C G A T A C T G A C T G T A G C C T G A A C T G
A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GTCCATCTGCWGGCAG
-ACCATCTGTT-----
 A C T G A G C T G A T C A T G C C G T A A C G T A G T C A C G T A T C G A G T C C G A T A C T G A C T G T A G C C T G A A C T G
A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GTCCATCTGCWGGCAG
---CAGCTGNT-----
 A C T G A G C T G A T C A T G C C G T A A C G T A G T C A C G T A T C G A G T C C G A T A C T G A C T G T A G C C T G A A C T G
A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GTCCATCTGCWGGCAG
-GCCATCTGTT-----
 A C T G A G C T G A T C A T G C C G T A A C G T A G T C A C G T A T C G A G T C C G A T A C T G A C T G T A G C C T G A A C T G
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GTCCATCTGCWGGCAG--
---DCHCAGCAGGRGGCC
 A C T G A G C T G A T C A T G C C G T A A C G T A G T C A C G T A T C G A G T C C G A T A C T G A C T G T A G C C T G A A C T G A C G T A C G T
A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

CTCF/MA0139.1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GTCCATCTGCWGGCAG
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C T G A G C T G A T C A T G C C G T A A C G T A G T C A C G T A T C G A G T C C G A T A C T G A C T G T A G C C T G A A C T G
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GTCCATCTGCWGGCAG
----CACAGCAGGGGG
 A C T G A G C T G A T C A T G C C G T A A C G T A G T C A C G T A T C G A G T C C G A T A C T G A C T G T A G C C T G A A C T G
A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------GTCCATCTGCWGGCAG
CNNBRGCGCCCCCTGSTGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T G A T C A T G C C G T A A C G T A G T C A C G T A T C G A G T C C G A T A C T G A C T G T A G C C T G A A C T G
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GTCCATCTGCWGGCAG
SNGCACCTGCHS----
 A C T G A G C T G A T C A T G C C G T A A C G T A G T C A C G T A T C G A G T C C G A T A C T G A C T G T A G C C T G A A C T G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T