Information for 25-AGAACCAAAT (Motif 39)

T C G A T C A G C G T A T C G A G T A C G A T C T C G A C G T A T C G A G C A T
Reverse Opposite:
C G T A A G C T G C A T A G C T C T A G C A T G A G C T G C A T A G T C A G C T
p-value:1e0
log p-value:-1.979e+00
Information Content per bp:1.616
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif83.6
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets81.7 +/- 12.6bp
Average Position of motif in Background45.9 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0005.1_Barhl1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGAACCAAAT-----
AACAACCAATTAATTC
 A C G T T C G A T C A G C G T A T C G A G T A C G A T C T C G A C G T A T C G A G C A T A C G T A C G T A C G T A C G T A C G T
G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C

PH0108.1_Msx3/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGAACCAAAT-----
CAAAACCAATTAATTT
 A C G T T C G A T C A G C G T A T C G A G T A C G A T C T C G A C G T A T C G A G C A T A C G T A C G T A C G T A C G T A C G T
T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

PH0006.1_Barhl2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGAACCAAAT-----
AAAAACCAATTAAGAA
 A C G T T C G A T C A G C G T A T C G A G T A C G A T C T C G A C G T A T C G A G C A T A C G T A C G T A C G T A C G T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGAACCAAAT
ATATGCAAAT
 T C G A T C A G C G T A T C G A G T A C G A T C T C G A C G T A T C G A G C A T
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGAACCAAAT----
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T T C G A T C A G C G T A T C G A G T A C G A T C T C G A C G T A T C G A G C A T A C G T A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGAACCAAAT-
-AAACCACANN
 T C G A T C A G C G T A T C G A G T A C G A T C T C G A C G T A T C G A G C A T A C G T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

POU2F2/MA0507.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGAACCAAAT---
ATATGCAAATNNN
 T C G A T C A G C G T A T C G A G T A C G A T C T C G A C G T A T C G A G C A T A C G T A C G T A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGAACCAAAT----
NWTAAYCYAATCAWN
 A C G T T C G A T C A G C G T A T C G A G T A C G A T C T C G A C G T A T C G A G C A T A C G T A C G T A C G T A C G T
C A T G G C A T C G A T C G T A C G T A G A T C A G T C A G C T C G T A C G T A A C G T A G T C C G T A C G T A G C A T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------AGAACCAAAT
NGNTCTAGAACCNGV-
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G C G T A T C G A G T A C G A T C T C G A C G T A T C G A G C A T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AGAACCAAAT----
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T T C G A T C A G C G T A T C G A G T A C G A T C T C G A C G T A T C G A G C A T A C G T A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A