Information for 24-YAATCWMSACASKCAG (Motif 36)

A G C T C G T A C G T A A C G T A G T C C G A T G T A C A T G C C G T A A G T C C G T A A T G C C A T G A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G G T A C A T C G A C G T C T A G A C G T A T C G A C T G C G T A A C T G C G T A A C G T A C G T C T G A
p-value:1e-6
log p-value:-1.432e+01
Information Content per bp:1.849
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.0 +/- 8.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0185.1_Tcf1_2/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--YAATCWMSACASKCAG
NNTAATCCNGNCNN----
 A C G T A C G T A G C T C G T A C G T A A C G T A G T C C G A T G T A C A T G C C G T A A G T C C G T A A T G C C A T G A G T C C G T A A C T G
G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A A C G T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:2
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-YAATCWMSACASKCAG
CCAATCAA---------
 A C G T A G C T C G T A C G T A A C G T A G T C C G A T G T A C A T G C C G T A A G T C C G T A A T G C C A T G A G T C C G T A A C T G
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-YAATCWMSACASKCAG
YTAATCCY---------
 A C G T A G C T C G T A C G T A A C G T A G T C C G A T G T A C A T G C C G T A A G T C C G T A A T G C C A T G A G T C C G T A A C T G
G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--YAATCWMSACASKCAG
TCCAATCCACA-------
 A C G T A C G T A G C T C G T A C G T A A C G T A G T C C G A T G T A C A T G C C G T A A G T C C G T A A T G C C A T G A G T C C G T A A C T G
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:YAATCWMSACASKCAG
--ATCACCCCAT----
 A G C T C G T A C G T A A C G T A G T C C G A T G T A C A T G C C G T A A G T C C G T A A T G C C A T G A G T C C G T A A C T G
A C G T A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:YAATCWMSACASKCAG
--ATCACCCCAC----
 A G C T C G T A C G T A A C G T A G T C C G A T G T A C A T G C C G T A A G T C C G T A A T G C C A T G A G T C C G T A A C T G
A C G T A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:7
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----YAATCWMSACASKCAG
CGACCCAATCAACGGTG----
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A C G T A A C G T A G T C C G A T G T A C A T G C C G T A A G T C C G T A A T G C C A T G A G T C C G T A A C T G
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-YAATCWMSACASKCAG
CAAATCACTG-------
 A C G T A G C T C G T A C G T A A C G T A G T C C G A T G T A C A T G C C G T A A G T C C G T A A T G C C A T G A G T C C G T A A C T G
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--YAATCWMSACASKCAG
NYTAATCCYB--------
 A C G T A C G T A G C T C G T A C G T A A C G T A G T C C G A T G T A C A T G C C G T A A G T C C G T A A T G C C A T G A G T C C G T A A C T G
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-YAATCWMSACASKCAG
TTAATCCC---------
 A C G T A G C T C G T A C G T A A C G T A G T C C G A T G T A C A T G C C G T A A G T C C G T A A T G C C A T G A G T C C G T A A C T G
G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T