Information for 22-TCTGGKTYCMGGCTGG (Motif 30)

A G C T A T G C C G A T A C T G A T C G C A G T A G C T A G C T A G T C G T A C C T A G C A T G A T G C A C G T A T C G C T A G
Reverse Opposite:
G A T C A T G C C G T A A T C G G T A C A G T C C A T G A C T G T C G A C T G A G T C A A T G C A G T C C G T A A T C G C T G A
p-value:1e-7
log p-value:-1.815e+01
Information Content per bp:1.732
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif17.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets70.7 +/- 14.1bp
Average Position of motif in Background46.8 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCTGGKTYCMGGCTGG
GGTCTGGCAT--------
 A C G T A C G T A G C T A T G C C G A T A C T G A T C G C A G T A G C T A G C T A G T C G T A C C T A G C A T G A T G C A C G T A T C G C T A G
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TCTGGKTYCMGGCTGG
GYCTGGYYTNTGTCA--
 A C G T A G C T A T G C C G A T A C T G A T C G C A G T A G C T A G C T A G T C G T A C C T A G C A T G A T G C A C G T A T C G C T A G
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A A C G T A C G T

Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer

Match Rank:3
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TCTGGKTYCMGGCTGG
NVCAKCTGGNNNCCAGMTGB
 A C G T A C G T A C G T A C G T A G C T A T G C C G A T A C T G A T C G C A G T A G C T A G C T A G T C G T A C C T A G C A T G A T G C A C G T A T C G C T A G
T A C G T G A C T G A C C G T A A C T G T A G C C G A T A C T G A T C G A G C T A T G C T C G A T A G C G T A C C G T A A C T G T G A C G C A T A C T G A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TCTGGKTYCMGGCTGG--
---GGCCYCCTGCTGDGH
 A G C T A T G C C G A T A C T G A T C G C A G T A G C T A G C T A G T C G T A C C T A G C A T G A T G C A C G T A T C G C T A G A C G T A C G T
A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----TCTGGKTYCMGGCTGG
VBSYGTCTGG-----------
 A C G T A C G T A C G T A C G T A C G T A G C T A T G C C G A T A C T G A T C G C A G T A G C T A G C T A G T C G T A C C T A G C A T G A T G C A C G T A T C G C T A G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.52
Offset:-7
Orientation:reverse strand
Alignment:-------TCTGGKTYCMGGCTGG
NNTNNTGTCTGGNNTNG------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T G C C G A T A C T G A T C G C A G T A G C T A G C T A G T C G T A C C T A G C A T G A T G C A C G T A T C G C T A G
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---TCTGGKTYCMGGCTGG
CTGTCTGG-----------
 A C G T A C G T A C G T A G C T A T G C C G A T A C T G A T C G C A G T A G C T A G C T A G T C G T A C C T A G C A T G A T G C A C G T A T C G C T A G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:TCTGGKTYCMGGCTGG
--TGGTTTCAGT----
 A G C T A T G C C G A T A C T G A T C G C A G T A G C T A G C T A G T C G T A C C T A G C A T G A T G C A C G T A T C G C T A G
A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TCTGGKTYCMGGCTGG----
--NAGTTTCABTHTGACTNW
 A G C T A T G C C G A T A C T G A T C G C A G T A G C T A G C T A G T C G T A C C T A G C A T G A T G C A C G T A T C G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.50
Offset:8
Orientation:forward strand
Alignment:TCTGGKTYCMGGCTGG--
--------CCTGCTGAGH
 A G C T A T G C C G A T A C T G A T C G C A G T A G C T A G C T A G T C G T A C C T A G C A T G A T G C A C G T A T C G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A