Information for 20-AAGACCAAGATATAGT (Motif 28)

C G T A C G T A A C T G C G T A G T A C G T A C C T G A C G T A A C T G C G T A A C G T C T G A C G A T C G T A A C T G A C G T
Reverse Opposite:
G T C A A G T C A C G T C G T A A G C T C G T A A C G T G T A C A C G T A G C T A C T G A C T G A C G T A G T C A C G T A C G T
p-value:1e-8
log p-value:-1.989e+01
Information Content per bp:1.914
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.2 +/- 25.8bp
Average Position of motif in Background81.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0063.1_Sox13_1/Jaspar

Match Rank:1
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AAGACCAAGATATAGT
TTAAGAACAATAAATT--
 A C G T A C G T C G T A C G T A A C T G C G T A G T A C G T A C C T G A C G T A A C T G C G T A A C G T C T G A C G A T C G T A A C T G A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AAGACCAAGATATAGT---
--GACAGAGATATCAGTGT
 C G T A C G T A A C T G C G T A G T A C G T A C C T G A C G T A A C T G C G T A A C G T C T G A C G A T C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:3
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:AAGACCAAGATATAGT
-----CCATATATGG-
 C G T A C G T A A C T G C G T A G T A C G T A C C T G A C G T A A C T G C G T A A C G T C T G A C G A T C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AAGACCAAGATATAGT
AAACAGACAAAGGAAT---
 A C G T A C G T A C G T C G T A C G T A A C T G C G T A G T A C G T A C C T G A C G T A A C T G C G T A A C G T C T G A C G A T C G T A A C T G A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:5
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AAGACCAAGATATAGT
TNNAGAACAATANATNN-
 A C G T A C G T C G T A C G T A A C T G C G T A G T A C G T A C C T G A C G T A A C T G C G T A A C G T C T G A C G A T C G T A A C T G A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:6
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:AAGACCAAGATATAGT
TTGACCTANTTATN--
 C G T A C G T A A C T G C G T A G T A C G T A C C T G A C G T A A C T G C G T A A C G T C T G A C G A T C G T A A C T G A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A A C G T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:7
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:AAGACCAAGATATAGT-
--AACAATGNTATTGTT
 C G T A C G T A A C T G C G T A G T A C G T A C C T G A C G T A A C T G C G T A A C G T C T G A C G A T C G T A A C T G A C G T A C G T
A C G T A C G T T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AAGACCAAGATATAGT
-AGATGKDGAGATAAG
 C G T A C G T A A C T G C G T A G T A C G T A C C T G A C G T A A C T G C G T A A C G T C T G A C G A T C G T A A C T G A C G T
A C G T C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G

PB0163.1_Six6_2/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:AAGACCAAGATATAGT--
-ANNNGGATATATCCNNN
 C G T A C G T A A C T G C G T A G T A C G T A C C T G A C G T A A C T G C G T A A C G T C T G A C G A T C G T A A C T G A C G T A C G T A C G T
A C G T G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:10
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--AAGACCAAGATATAGT
TTTAGAACAATAAAAT--
 A C G T A C G T C G T A C G T A A C T G C G T A G T A C G T A C C T G A C G T A A C T G C G T A A C G T C T G A C G A T C G T A A C T G A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T A C G T A C G T