Information for 18-GMGGGCCWGTCTC (Motif 24)

A T C G G T A C T A C G C A T G A C T G A T G C A G T C C G T A A T C G A C G T A G T C A G C T A T G C
Reverse Opposite:
A T C G C T G A A C T G G T C A A T G C C G A T A C T G T A C G A G T C G T A C A T G C A C T G A T G C
p-value:1e-8
log p-value:-2.047e+01
Information Content per bp:1.744
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.79%
Number of Background Sequences with motif84.9
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets39.7 +/- 19.6bp
Average Position of motif in Background47.5 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GMGGGCCWGTCTC-
GGNGCGNCTGTTNNN
 A C G T A T C G G T A C T A C G C A T G A C T G A T G C A G T C C G T A A T C G A C G T A G T C A G C T A T G C A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GMGGGCCWGTCTC-
------CTGTCTGG
 A T C G G T A C T A C G C A T G A C T G A T G C A G T C C G T A A T C G A C G T A G T C A G C T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GMGGGCCWGTCTC------
----ACCACTCTCGGTCAC
 A T C G G T A C T A C G C A T G A C T G A T G C A G T C C G T A A T C G A C G T A G T C A G C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GMGGGCCWGTCTC-
----VBSYGTCTGG
 A T C G G T A C T A C G C A T G A C T G A T G C A G T C C G T A A T C G A C G T A G T C A G C T A T G C A C G T
A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GMGGGCCWGTCTC
-SCTGTCAVTCAV
 A T C G G T A C T A C G C A T G A C T G A T G C A G T C C G T A A T C G A C G T A G T C A G C T A T G C
A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

PB0138.1_Irf4_2/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GMGGGCCWGTCTC------
----AGTATTCTCGGTTGC
 A T C G G T A C T A C G C A T G A C T G A T G C A G T C C G T A A T C G A C G T A G T C A G C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

PB0137.1_Irf3_2/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GMGGGCCWGTCTC-
NNGCACCTTTCTCC
 A T C G G T A C T A C G C A T G A C T G A T G C A G T C C G T A A T C G A C G T A G T C A G C T A T G C A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GMGGGCCWGTCTC--
---GGCCACRCCCMK
 A T C G G T A C T A C G C A T G A C T G A T G C A G T C C G T A A T C G A C G T A G T C A G C T A T G C A C G T A C G T
A C G T A C G T A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G

PB0139.1_Irf5_2/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GMGGGCCWGTCTC------
----NNAATTCTCGNTNAN
 A T C G G T A C T A C G C A T G A C T G A T G C A G T C C G T A A T C G A C G T A G T C A G C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GMGGGCCWGTCTC
-NCTGTCAATCAN
 A T C G G T A C T A C G C A T G A C T G A T G C A G T C C G T A A T C G A C G T A G T C A G C T A T G C
A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A