Information for 15-GCAKATGYGCTCCAGC (Motif 18)

T C A G T A G C C G T A A C G T T C G A A C G T C T A G A G C T A T C G A T G C C A G T A G T C A G T C C G T A A C T G A T G C
Reverse Opposite:
A T C G A G T C A C G T A C T G T A C G G C T A A T C G T A G C T C G A A G T C C G T A A C G T T G C A C G A T A T C G A G T C
p-value:1e-10
log p-value:-2.371e+01
Information Content per bp:1.722
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif20.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets33.6 +/- 15.5bp
Average Position of motif in Background49.6 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GCAKATGYGCTCCAGC----
VCAKCTGGNNNCCAGMTGBN
 T C A G T A G C C G T A A C G T T C G A A C G T C T A G A G C T A T C G A T G C C A G T A G T C A G T C C G T A A C T G A T G C A C G T A C G T A C G T A C G T
T G A C G T A C C G T A A C T G T G A C C G A T A C T G A T C G A G C T T A C G T C G A T A G C G T A C C G T A A T C G T G A C G C A T A C T G A C T G A T G C

Bhlha15/MA0607.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCAKATGYGCTCCAGC
CCATATGT--------
 T C A G T A G C C G T A A C G T T C G A A C G T C T A G A G C T A T C G A T G C C A G T A G T C A G T C C G T A A C T G A T G C
T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCAKATGYGCTCCAGC
ACCATATGTT-------
 A C G T T C A G T A G C C G T A A C G T T C G A A C G T C T A G A G C T A T C G A T G C C A G T A G T C A G T C C G T A A C T G A T G C
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.56
Offset:12
Orientation:forward strand
Alignment:GCAKATGYGCTCCAGC-
------------CAGCC
 T C A G T A G C C G T A A C G T T C G A A C G T C T A G A G C T A T C G A T G C C A G T A G T C A G T C C G T A A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

Atoh1/MA0461.2/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCAKATGYGCTCCAGC
ANCATATGTT-------
 A C G T T C A G T A G C C G T A A C G T T C G A A C G T C T A G A G C T A T C G A T G C C A G T A G T C A G T C C G T A A C T G A T G C
C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCAKATGYGCTCCAGC
NVCAGCTGBBNN-----
 A C G T T C A G T A G C C G T A A C G T T C G A A C G T C T A G A G C T A T C G A T G C C A G T A G T C A G T C C G T A A C T G A T G C
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T A C G T A C G T A C G T

NEUROG2/MA0669.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCAKATGYGCTCCAGC
AACATATGTC-------
 A C G T T C A G T A G C C G T A A C G T T C G A A C G T C T A G A G C T A T C G A T G C C A G T A G T C A G T C C G T A A C T G A T G C
T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BHLHE22/MA0818.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCAKATGYGCTCCAGC
ANCATATGGT-------
 A C G T T C A G T A G C C G T A A C G T T C G A A C G T C T A G A G C T A T C G A T G C C A G T A G T C A G T C C G T A A C T G A T G C
C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCAKATGYGCTCCAGC
CGCAGCTGCG-------
 A C G T T C A G T A G C C G T A A C G T T C G A A C G T C T A G A G C T A T C G A T G C C A G T A G T C A G T C C G T A A C T G A T G C
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCAKATGYGCTCCAGC
RCCATMTGTT-------
 A C G T T C A G T A G C C G T A A C G T T C G A A C G T C T A G A G C T A T C G A T G C C A G T A G T C A G T C C G T A A C T G A T G C
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T