Information for 12-RWTCMCCAGSAGGAWS (Motif 16)

C T A G C G A T C G A T A G T C G T C A A G T C A G T C C G T A A C T G A T G C C G T A A C T G A C T G C G T A C G A T A T C G
Reverse Opposite:
A T G C C G T A A C G T A G T C A G T C A C G T A T C G A G T C A C G T A C T G A C T G A C G T A C T G C G T A C G T A A G T C
p-value:1e-11
log p-value:-2.567e+01
Information Content per bp:1.849
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.8 +/- 27.3bp
Average Position of motif in Background87.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.68
Offset:4
Orientation:forward strand
Alignment:RWTCMCCAGSAGGAWS
----CACAGCAGGGGG
 C T A G C G A T C G A T A G T C G T C A A G T C A G T C C G T A A C T G A T G C C G T A A C T G A C T G C G T A C G A T A T C G
A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:RWTCMCCAGSAGGAWS--
---DCHCAGCAGGRGGCC
 C T A G C G A T C G A T A G T C G T C A A G T C A G T C C G T A A C T G A T G C C G T A A C T G A C T G C G T A C G A T A T C G A C G T A C G T
A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:RWTCMCCAGSAGGAWS-
-------ANCAGGATGT
 C T A G C G A T C G A T A G T C G T C A A G T C A G T C C G T A A C T G A T G C C G T A A C T G A C T G C G T A C G A T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:RWTCMCCAGSAGGAWS
-CCACACAGCAGGAGA
 C T A G C G A T C G A T A G T C G T C A A G T C A G T C C G T A A C T G A T G C C G T A A C T G A C T G C G T A C G A T A T C G
A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:RWTCMCCAGSAGGAWS
-CCACACAGCAGGAGA
 C T A G C G A T C G A T A G T C G T C A A G T C A G T C C G T A A C T G A T G C C G T A A C T G A C T G C G T A C G A T A T C G
A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:RWTCMCCAGSAGGAWS
---DCTCAGCAGG---
 C T A G C G A T C G A T A G T C G T C A A G T C A G T C C G T A A C T G A T G C C G T A A C T G A C T G C G T A C G A T A T C G
A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:RWTCMCCAGSAGGAWS
-GAGCACAGCAGGACA
 C T A G C G A T C G A T A G T C G T C A A G T C A G T C C G T A A C T G A T G C C G T A A C T G A C T G C G T A C G A T A T C G
A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.60
Offset:7
Orientation:forward strand
Alignment:RWTCMCCAGSAGGAWS-
-------ANCAGGAAGT
 C T A G C G A T C G A T A G T C G T C A A G T C A G T C C G T A A C T G A T G C C G T A A C T G A C T G C G T A C G A T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:RWTCMCCAGSAGGAWS
--TCCCCA--------
 C T A G C G A T C G A T A G T C G T C A A G T C A G T C C G T A A C T G A T G C C G T A A C T G A C T G C G T A C G A T A T C G
A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:10
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:RWTCMCCAGSAGGAWS---
-------NDCAGGAARTNN
 C T A G C G A T C G A T A G T C G T C A A G T C A G T C C G T A A C T G A T G C C G T A A C T G A C T G C G T A C G A T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G