Information for 13-SCATTTRTTASYA (Motif 15)

A T G C A G T C C G T A A C G T A C G T A C G T C T A G A C G T A C G T C G T A A T G C A G T C C T G A
Reverse Opposite:
A G C T C T A G A T C G A C G T G T C A C G T A A G T C C G T A C G T A C G T A A C G T A C T G A T C G
p-value:1e-11
log p-value:-2.567e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.0 +/- 25.5bp
Average Position of motif in Background77.1 +/- 6.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:SCATTTRTTASYA--
NCNTTTGTTATTTNN
 A T G C A G T C C G T A A C G T A C G T A C G T C T A G A C G T A C G T C G T A A T G C A G T C C T G A A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

PH0062.1_Hoxb7/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--SCATTTRTTASYA-
TNNCATTAATTANTNC
 A C G T A C G T A T G C A G T C C G T A A C G T A C G T A C G T C T A G A C G T A C G T C G T A A T G C A G T C C T G A A C G T
A G C T C G A T T A C G G T A C T G C A A C G T G A C T G T C A G C T A C G A T C A G T C T G A T G A C A C G T T C G A T A G C

PB0129.1_Glis2_2/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:SCATTTRTTASYA--
-TCTTTANTAATANN
 A T G C A G T C C G T A A C G T A C G T A C G T C T A G A C G T A C G T C G T A A T G C A G T C C T G A A C G T A C G T
A C G T A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T

PH0135.1_Phox2a/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--SCATTTRTTASYA-
CAGCATTAATTAGTAG
 A C G T A C G T A T G C A G T C C G T A A C G T A C G T A C G T C T A G A C G T A C G T C G T A A T G C A G T C C T G A A C G T
A G T C T C G A A C T G G T A C T C G A G A C T A G C T C G T A C T G A C G A T A C G T C T G A C T A G A G C T T C A G T A C G

PH0055.1_Hoxa7_2/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--SCATTTRTTASYA-
TNCCATTAATTACTNC
 A C G T A C G T A T G C A G T C C G T A A C G T A C G T A C G T C T A G A C G T A C G T C G T A A T G C A G T C C T G A A C G T
A C G T C A G T A T G C A G T C T G C A A C G T G C A T G T C A C G T A A C G T C A G T C G T A T G A C A C G T T G C A T G A C

CDX1/MA0878.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:SCATTTRTTASYA
--TTTTATTGC--
 A T G C A G T C C G T A A C G T A C G T A C G T C T A G A C G T A C G T C G T A A T G C A G T C C T G A
A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-SCATTTRTTASYA
ACCATCTGTT----
 A C G T A T G C A G T C C G T A A C G T A C G T A C G T C T A G A C G T A C G T C G T A A T G C A G T C C T G A
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:SCATTTRTTASYA
-NTTTTATTACN-
 A T G C A G T C C G T A A C G T A C G T A C G T C T A G A C G T A C G T C G T A A T G C A G T C C T G A
A C G T C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C A C G T

Twist2/MA0633.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-SCATTTRTTASYA
ACCATATGTT----
 A C G T A T G C A G T C C G T A A C G T A C G T A C G T C T A G A C G T A C G T C G T A A T G C A G T C C T G A
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:SCATTTRTTASYA
-NTTTTATGAC--
 A T G C A G T C C G T A A C G T A C G T A C G T C T A G A C G T A C G T C G T A A T G C A G T C C T G A
A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T