Information for 11-GGCCAGCCSTGGK (Motif 13)

A C T G C T A G A G T C A G T C G C T A A C T G A G T C G A T C A T C G A C G T C T A G A C T G A C G T
Reverse Opposite:
G T C A A G T C A G T C G T C A A T G C C T A G A C T G A G T C C G A T A C T G A C T G A G T C G T A C
p-value:1e-11
log p-value:-2.656e+01
Information Content per bp:1.814
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif9.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.1 +/- 23.7bp
Average Position of motif in Background36.8 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:1
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GGCCAGCCSTGGK
--CCAGCTGTTN-
 A C T G C T A G A G T C A G T C G C T A A C T G A G T C G A T C A T C G A C G T C T A G A C T G A C G T
A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGCCAGCCSTGGK
ATGCCAACC-----
 A C G T A C T G C T A G A G T C A G T C G C T A A C T G A G T C G A T C A T C G A C G T C T A G A C T G A C G T
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGCCAGCCSTGGK--
GACCCCCCGCTGTGC
 A C T G C T A G A G T C A G T C G C T A A C T G A G T C G A T C A T C G A C G T C T A G A C T G A C G T A C G T A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

PB0101.1_Zic1_1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GGCCAGCCSTGGK---
--CCCCCCCGGGGGNN
 A C T G C T A G A G T C A G T C G C T A A C T G A G T C G A T C A T C G A C G T C T A G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGCCAGCCSTGGK
CCCCCTGCTGTG--
 A C G T A C T G C T A G A G T C A G T C G C T A A C T G A G T C G A T C A T C G A C G T C T A G A C T G A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGCCAGCCSTGGK-
NNTCCTGCTGTGNNN
 A C G T A C T G C T A G A G T C A G T C G C T A A C T G A G T C G A T C A T C G A C G T C T A G A C T G A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GGCCAGCCSTGGK
GGCCYCCTGCTGDGH-
 A C G T A C G T A C G T A C T G C T A G A G T C A G T C G C T A A C T G A G T C G A T C A T C G A C G T C T A G A C T G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GGCCAGCCSTGGK--
-ACATGCCCGGGCAT
 A C T G C T A G A G T C A G T C G C T A A C T G A G T C G A T C A T C G A C G T C T A G A C T G A C G T A C G T A C G T
A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGCCAGCCSTGGK-
TNTCCTGCTGTGNNG
 A C G T A C T G C T A G A G T C A G T C G C T A A C T G A G T C G A T C A T C G A C G T C T A G A C T G A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GGCCAGCCSTGGK
---CAGCC-----
 A C T G C T A G A G T C A G T C G C T A A C T G A G T C G A T C A T C G A C G T C T A G A C T G A C G T
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T