Information for 6-ATGAGCAGRCAGC (Motif 6)

C G T A C G A T A C T G C G T A C T A G G A T C C G T A A C T G C T G A A G T C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G G A C T A G T C A C G T C T A G G A T C C G A T G T A C C G T A A C G T
p-value:1e-14
log p-value:-3.392e+01
Information Content per bp:1.856
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif10.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.7 +/- 32.2bp
Average Position of motif in Background48.7 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:ATGAGCAGRCAGC
-------CACAGN
 C G T A C G A T A C T G C G T A C T A G G A T C C G T A A C T G C T G A A G T C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:ATGAGCAGRCAGC
----CCAGACAG-
 C G T A C G A T A C T G C G T A C T A G G A T C C G T A A C T G C T G A A G T C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:ATGAGCAGRCAGC-
----TGAGTCAGCA
 C G T A C G A T A C T G C G T A C T A G G A T C C G T A A C T G C T G A A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.57
Offset:9
Orientation:forward strand
Alignment:ATGAGCAGRCAGC-
---------CAGCC
 C G T A C G A T A C T G C G T A C T A G G A T C C G T A A C T G C T G A A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:ATGAGCAGRCAGC-
----CCAGACRSVB
 C G T A C G A T A C T G C G T A C T A G G A T C C G T A A C T G C T G A A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

MAFG/MA0659.1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATGAGCAGRCAGC-----
AAATTGCTGAGTCAGCATATT
 A C G T A C G T A C G T C G T A C G A T A C T G C G T A C T A G G A T C C G T A A C T G C T G A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C G T A C G T A G C T A C G A T G A C T T A C G G T A C G A C T C A T G G C T A A T C G C A G T G T A C C T G A C A T G A T G C C T G A G C A T C G T A G C A T G C A T

MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ATGAGCAGRCAGC------
WNTGCTGASTCAGCANWTTY
 A C G T C G T A C G A T A C T G C G T A C T A G G A T C C G T A A C T G C T G A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G A C T C G A T A T C G G T A C G C A T C A T G C G T A T A C G G C A T G T A C C G T A C A T G A T G C G C T A C T A G G C A T G C A T G C A T G A C T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATGAGCAGRCAGC
-TGCTGASTCAGC
 C G T A C G A T A C T G C G T A C T A G G A T C C G T A A C T G C T G A A G T C C G T A A C T G A G T C
A C G T A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:ATGAGCAGRCAGC
----BCAGACWA-
 C G T A C G A T A C T G C G T A C T A G G A T C C G T A A C T G C T G A A G T C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.55
Offset:7
Orientation:forward strand
Alignment:ATGAGCAGRCAGC-----
-------GACAGCTGCAG
 C G T A C G A T A C T G C G T A C T A G G A T C C G T A A C T G C T G A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G