Information for 20-GTACTTTSAG (Motif 32)

A C T G C G A T C G T A A T G C A C G T C G A T A C G T A T G C C G T A C T A G
Reverse Opposite:
A G T C C G A T T A C G C G T A G C T A T C G A T A C G A C G T C G T A G T A C
p-value:1e-5
log p-value:-1.363e+01
Information Content per bp:1.754
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif152.7
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets49.9 +/- 31.3bp
Average Position of motif in Background54.0 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:1
Score:0.70
Offset:-7
Orientation:forward strand
Alignment:-------GTACTTTSAG
ACTCCAAGTACTTGGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T C G T A A T G C A C G T C G A T A C G T A T G C C G T A C T A G
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

Hnf4a/MA0114.3/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GTACTTTSAG---
ATTGGACTTTGACCCC
 A C G T A C G T A C G T A C T G C G A T C G T A A T G C A C G T C G A T A C G T A T G C C G T A C T A G A C G T A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

PH0117.1_Nkx3-1/Jaspar

Match Rank:3
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------GTACTTTSAG
NATTTAAGTACTTANNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T C G T A A T G C A C G T C G A T A C G T A T G C C G T A C T A G
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTACTTTSAG-
-TGGTTTCAGT
 A C T G C G A T C G T A A T G C A C G T C G A T A C G T A T G C C G T A C T A G A C G T
A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTACTTTSAG-----
TGGACTTTGNNCTNTG
 A C G T A C T G C G A T C G T A A T G C A C G T C G A T A C G T A T G C C G T A C T A G A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTACTTTSAG--
GWAAYHTGABMC
 A C T G C G A T C G T A A T G C A C G T C G A T A C G T A T G C C G T A C T A G A C G T A C G T
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

HNF4G/MA0484.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTACTTTSAG----
TGGACTTTGNNCTCN
 A C G T A C T G C G A T C G T A A T G C A C G T C G A T A C G T A T G C C G T A C T A G A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GTACTTTSAG-
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T A C G T A C T G C G A T C G T A A T G C A C G T C G A T A C G T A T G C C G T A C T A G A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

PH0116.1_Nkx2-9/Jaspar

Match Rank:9
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------GTACTTTSAG
NATTTAAGTACTTNAAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T C G T A A T G C A C G T C G A T A C G T A T G C C G T A C T A G
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

PH0112.1_Nkx2-3/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GTACTTTSAG
CNTTAAGTACTTAANG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T C G T A A T G C A C G T C G A T A C G T A T G C C G T A C T A G
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G