Information for 17-CTCCGGGCCGGCT (Motif 29)

A G T C A C G T A T G C A T G C A C T G A C T G A C T G A G T C A G T C A C T G A T C G A G T C A C G T
Reverse Opposite:
C G T A A C T G A T G C A G T C A C T G A C T G A G T C A G T C A G T C A T C G A T C G C G T A A C T G
p-value:1e-7
log p-value:-1.710e+01
Information Content per bp:1.946
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.2 +/- 28.0bp
Average Position of motif in Background58.1 +/- 3.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTCCGGGCCGGCT
-TNNGGGCAG---
 A G T C A C G T A T G C A T G C A C T G A C T G A C T G A G T C A G T C A C T G A T C G A G T C A C G T
A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTCCGGGCCGGCT
--CTAGGCCT---
 A G T C A C G T A T G C A T G C A C T G A C T G A C T G A G T C A G T C A C T G A T C G A G T C A C G T
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CTCCGGGCCGGCT
-----GGCGCGCT
 A G T C A C G T A T G C A T G C A C T G A C T G A C T G A G T C A G T C A C T G A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTCCGGGCCGGCT--
NNTNAGGGGCGGNNNN
 A C G T A G T C A C G T A T G C A T G C A C T G A C T G A C T G A G T C A G T C A C T G A T C G A G T C A C G T A C G T A C G T
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CTCCGGGCCGGCT
GCTCCG--------
 A C G T A G T C A C G T A T G C A T G C A C T G A C T G A C T G A G T C A G T C A C T G A T C G A G T C A C G T
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:6
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CTCCGGGCCGGCT---
NNTNNGGGGCGGNGNGN
 A C G T A G T C A C G T A T G C A T G C A C T G A C T G A C T G A G T C A G T C A C T G A T C G A G T C A C G T A C G T A C G T A C G T
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:7
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----CTCCGGGCCGGCT
TCACCTCTGGGCAG---
 A C G T A C G T A C G T A C G T A G T C A C G T A T G C A T G C A C T G A C T G A C T G A G T C A G T C A C T G A T C G A G T C A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:8
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---CTCCGGGCCGGCT
CCCCCCCGGGGGGGT-
 A C G T A C G T A C G T A G T C A C G T A T G C A T G C A C T G A C T G A C T G A G T C A G T C A C T G A T C G A G T C A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CTCCGGGCCGGCT
NCNCAGCGGGGGGTC-
 A C G T A C G T A C G T A G T C A C G T A T G C A T G C A C T G A C T G A C T G A G T C A G T C A C T G A T C G A G T C A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--CTCCGGGCCGGCT
GCCTCAGGGCAT---
 A C G T A C G T A G T C A C G T A T G C A T G C A C T G A C T G A C T G A G T C A G T C A C T G A T C G A G T C A C G T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T A C G T