Information for 18-GCTGCTACCC (Motif 27)

A C T G G T A C A C G T A T C G G T A C G C A T T C G A A G T C G T A C A G T C
Reverse Opposite:
A C T G A C T G C T A G A G C T C G T A A C T G T A G C C G T A A C T G A G T C
p-value:1e-8
log p-value:-1.927e+01
Information Content per bp:1.838
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.33%
Number of Background Sequences with motif174.9
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets45.8 +/- 22.1bp
Average Position of motif in Background50.0 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Spz1/MA0111.1/Jaspar

Match Rank:1
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:GCTGCTACCC-
GCTGTTACCCT
 A C T G G T A C A C G T A T C G G T A C G C A T T C G A A G T C G T A C A G T C A C G T
A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:2
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----GCTGCTACCC-
AGATGCTRCTRCCHT
 A C G T A C G T A C G T A C G T A C T G G T A C A C G T A T C G G T A C G C A T T C G A A G T C G T A C A G T C A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

PB0059.1_Six6_1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GCTGCTACCC----
ANANNTGATACCCNATN
 A C G T A C G T A C G T A C T G G T A C A C G T A T C G G T A C G C A T T C G A A G T C G T A C A G T C A C G T A C G T A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

PH0166.1_Six6_2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCTGCTACCC----
AATNTTGATACCCTATN
 A C G T A C G T A C G T A C T G G T A C A C G T A T C G G T A C G C A T T C G A A G T C G T A C A G T C A C G T A C G T A C G T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

Six3/MA0631.1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCTGCTACCC----
ANANGTGATACCCTATN
 A C G T A C G T A C G T A C T G G T A C A C G T A T C G G T A C G C A T T C G A A G T C G T A C A G T C A C G T A C G T A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0163.1_Six3/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCTGCTACCC----
ANANGTGATACCCTATN
 A C G T A C G T A C G T A C T G G T A C A C G T A T C G G T A C G C A T T C G A A G T C G T A C A G T C A C G T A C G T A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0165.1_Six6_1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCTGCTACCC----
ANANNTGATACCCTATN
 A C G T A C G T A C G T A C T G G T A C A C G T A T C G G T A C G C A T T C G A A G T C G T A C A G T C A C G T A C G T A C G T A C G T
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T

PH0161.1_Six1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCTGCTACCC----
ANNNATGATACCCCATC
 A C G T A C G T A C G T A C T G G T A C A C G T A T C G G T A C G C A T T C G A A G T C G T A C A G T C A C G T A C G T A C G T A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

PH0162.1_Six2/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GCTGCTACCC----
ANANGTGATACCCCATT
 A C G T A C G T A C G T A C T G G T A C A C G T A T C G G T A C G C A T T C G A A G T C G T A C A G T C A C G T A C G T A C G T A C G T
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCTACCC
NGCTN------
 A C G T A C T G G T A C A C G T A T C G G T A C G C A T T C G A A G T C G T A C A G T C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T