Information for 21-RTTKCCTGMCAKWAMA (Motif 26)

C T A G A C G T A C G T A C G T A G T C A G T C A C G T A C T G G T C A A T G C C T G A A C G T G C A T C G T A G T C A C G T A
Reverse Opposite:
A C G T A C G T A C G T C G T A G T C A A G C T A T C G A C G T A G T C C G T A A C T G A C T G G T C A C G T A C G T A A G T C
p-value:1e-8
log p-value:-1.986e+01
Information Content per bp:1.848
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.8 +/- 21.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:RTTKCCTGMCAKWAMA
ATTTCCTGTN------
 C T A G A C G T A C G T A C G T A G T C A G T C A C G T A C T G G T C A A T G C C T G A A C G T G C A T C G T A G T C A C G T A
T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:RTTKCCTGMCAKWAMA
ATTTCCTGTN------
 C T A G A C G T A C G T A C G T A G T C A G T C A C G T A C T G G T C A A T G C C T G A A C G T G C A T C G T A G T C A C G T A
C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F7/MA0758.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:RTTKCCTGMCAKWAMA
TTTTCCCGCCAAAA--
 C T A G A C G T A C G T A C G T A G T C A G T C A C G T A C T G G T C A A T G C C T G A A C G T G C A T C G T A G T C A C G T A
C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-RTTKCCTGMCAKWAMA
CACTTCCTGT-------
 A C G T C T A G A C G T A C G T A C G T A G T C A G T C A C G T A C T G G T C A A T G C C T G A A C G T G C A T C G T A G T C A C G T A
A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F8/MA0865.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:RTTKCCTGMCAKWAMA
-TTTCCCGCCAAA---
 C T A G A C G T A C G T A C G T A G T C A G T C A C G T A C T G G T C A A T G C C T G A A C G T G C A T C G T A G T C A C G T A
A C G T G A C T A G C T A C G T A G T C A G T C A T G C T A C G A G T C T A G C C T G A C G T A G C T A A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--RTTKCCTGMCAKWAMA
NNAYTTCCTGHN------
 A C G T A C G T C T A G A C G T A C G T A C G T A G T C A G T C A C G T A C T G G T C A A T G C C T G A A C G T G C A T C G T A G T C A C G T A
A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:RTTKCCTGMCAKWAMA
-TTGCGTGCVA-----
 C T A G A C G T A C G T A C G T A G T C A G T C A C G T A C T G G T C A A T G C C T G A A C G T G C A T C G T A G T C A C G T A
A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-RTTKCCTGMCAKWAMA
CAAATCCAGACATCACA
 A C G T C T A G A C G T A C G T A C G T A G T C A G T C A C G T A C T G G T C A A T G C C T G A A C G T G C A T C G T A G T C A C G T A
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

PH0105.1_Meis3/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-RTTKCCTGMCAKWAMA
AATTACCTGTCAATAC-
 A C G T C T A G A C G T A C G T A C G T A G T C A G T C A C G T A C T G G T C A A T G C C T G A A C G T G C A T C G T A G T C A C G T A
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-RTTKCCTGMCAKWAMA
VDTTTCCCGCCA-----
 A C G T C T A G A C G T A C G T A C G T A G T C A G T C A C G T A C T G G T C A A T G C C T G A A C G T G C A T C G T A G T C A C G T A
T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A A C G T A C G T A C G T A C G T A C G T