Information for 20-CTGCCACCCYAATCTT (Motif 25)

A G T C C G A T A C T G T A G C A G T C C G T A A G T C A G T C A G T C A G C T G C T A T C G A C G A T A G T C C G A T C G A T
Reverse Opposite:
C G T A C G T A A C T G G C T A A G C T C G A T T C G A T C A G C T A G T A C G C G A T A C T G A C T G G T A C C G T A A C T G
p-value:1e-8
log p-value:-1.986e+01
Information Content per bp:1.700
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.2 +/- 32.3bp
Average Position of motif in Background66.5 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CTGCCACCCYAATCTT
CTGTCTGTCACCT-------
 A C G T A C G T A C G T A C G T A G T C C G A T A C T G T A G C A G T C C G T A A G T C A G T C A G T C A G C T G C T A T C G A C G A T A G T C C G A T C G A T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CTGCCACCCYAATCTT
TGTCTGDCACCT-------
 A C G T A C G T A C G T A G T C C G A T A C T G T A G C A G T C C G T A A G T C A G T C A G T C A G C T G C T A T C G A C G A T A G T C C G A T C G A T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CTGCCACCCYAATCTT
ACTATGCCAACCTACC---
 A C G T A C G T A C G T A G T C C G A T A C T G T A G C A G T C C G T A A G T C A G T C A G T C A G C T G C T A T C G A C G A T A G T C C G A T C G A T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTGCCACCCYAATCTT
-TGACACCT-------
 A G T C C G A T A C T G T A G C A G T C C G T A A G T C A G T C A G T C A G C T G C T A T C G A C G A T A G T C C G A T C G A T
A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:CTGCCACCCYAATCTT
-------YSTTATCT-
 A G T C C G A T A C T G T A G C A G T C C G T A A G T C A G T C A G T C A G C T G C T A T C G A C G A T A G T C C G A T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTGCCACCCYAATCTT
AAGCCCCCCAAAAAT-
 A G T C C G A T A C T G T A G C A G T C C G T A A G T C A G T C A G T C A G C T G C T A T C G A C G A T A G T C C G A T C G A T
C T G A C T G A T C A G T A G C T A G C G T A C G T A C A G T C G A T C G C T A G C T A G C T A C G T A G T C A A G C T A C G T

GATA5/MA0766.1/Jaspar

Match Rank:7
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:CTGCCACCCYAATCTT
-------TCTTATCT-
 A G T C C G A T A C T G T A G C A G T C C G T A A G T C A G T C A G T C A G C T G C T A T C G A C G A T A G T C C G A T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T G C G A C T C G A T C G T A A G C T A G T C C G A T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CTGCCACCCYAATCTT
VGCTGWCAVB--------
 A C G T A C G T A G T C C G A T A C T G T A G C A G T C C G T A A G T C A G T C A G T C A G C T G C T A T C G A C G A T A G T C C G A T C G A T
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CTGCCACCCYAATCTT
ATGCCAACC-------
 A G T C C G A T A C T G T A G C A G T C C G T A A G T C A G T C A G T C A G C T G C T A T C G A C G A T A G T C C G A T C G A T
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:10
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:CTGCCACCCYAATCTT
-------TCTTATCT-
 A G T C C G A T A C T G T A G C A G T C C G T A A G T C A G T C A G T C A G C T G C T A T C G A C G A T A G T C C G A T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T