Information for 17-GKYTYTKGTTTCCWTC (Motif 23)

A C T G A C T G G A C T A C G T A G C T A C G T A C T G A C T G A C G T A C G T A C G T A G T C A G T C C G T A A C G T A G T C
Reverse Opposite:
C T A G T G C A G C A T A C T G A C T G C G T A C G T A C G T A A G T C G T A C C G T A T C A G C G T A C T G A T G A C A G T C
p-value:1e-8
log p-value:-2.017e+01
Information Content per bp:1.861
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.6 +/- 13.0bp
Average Position of motif in Background24.0 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0036.1_Irf6_1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GKYTYTKGTTTCCWTC--
-NNNTTGGTTTCGNTNNN
 A C T G A C T G G A C T A C G T A G C T A C G T A C T G A C T G A C G T A C G T A C G T A G T C A G T C C G T A A C G T A G T C A C G T A C G T
A C G T G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GKYTYTKGTTTCCWTC
GKMTCADRTTWC----
 A C T G A C T G G A C T A C G T A G C T A C G T A C T G A C T G A C G T A C G T A C G T A G T C A G T C C G T A A C G T A G T C
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T A C G T A C G T A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GKYTYTKGTTTCCWTC--
---TNTGGTTTCGATACN
 A C T G A C T G G A C T A C G T A G C T A C G T A C T G A C T G A C G T A C G T A C G T A G T C A G T C C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.62
Offset:6
Orientation:forward strand
Alignment:GKYTYTKGTTTCCWTC
------ATTTTCCATT
 A C T G A C T G G A C T A C G T A G C T A C G T A C T G A C T G A C G T A C G T A C G T A G T C A G T C C G T A A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

NFATC3/MA0625.1/Jaspar

Match Rank:5
Score:0.61
Offset:6
Orientation:forward strand
Alignment:GKYTYTKGTTTCCWTC
------ATTTTCCATT
 A C T G A C T G G A C T A C G T A G C T A C G T A C T G A C T G A C G T A C G T A C G T A G T C A G T C C G T A A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

NFATC1/MA0624.1/Jaspar

Match Rank:6
Score:0.61
Offset:6
Orientation:forward strand
Alignment:GKYTYTKGTTTCCWTC
------ATTTTCCATT
 A C T G A C T G G A C T A C G T A G C T A C G T A C T G A C T G A C G T A C G T A C G T A G T C A G T C C G T A A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

IRF9/MA0653.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GKYTYTKGTTTCCWTC
AGTTTCGGTTTCGTT-
 A C T G A C T G G A C T A C G T A G C T A C G T A C T G A C T G A C G T A C G T A C G T A G T C A G T C C G T A A C G T A G T C
C T G A A T C G C G A T C G A T A C G T G A T C C T A G A T C G C A G T C G A T A C G T G A T C C T A G C G A T C G A T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GKYTYTKGTTTCCWTC
-----TGGTTTCAGT-
 A C T G A C T G G A C T A C G T A G C T A C G T A C T G A C T G A C G T A C G T A C G T A G T C A G T C C G T A A C G T A G T C
A C G T A C G T A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GKYTYTKGTTTCCWTC
-NNTGTGGTTT-----
 A C T G A C T G G A C T A C G T A G C T A C G T A C T G A C T G A C G T A C G T A C G T A G T C A G T C C G T A A C G T A G T C
A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:10
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GKYTYTKGTTTCCWTC---
-----CAGTTTCGNTTCTN
 A C T G A C T G G A C T A C G T A G C T A C G T A C T G A C T G A C G T A C G T A C G T A G T C A G T C C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C