Information for 10-SCKAAAAGCCTGR (Motif 14)

A T G C A G T C A C T G G T C A C G T A C G T A C G T A A C T G A G T C A G T C A C G T A C T G T C A G
Reverse Opposite:
A G C T A G T C C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T G T A C A C T G A T C G
p-value:1e-11
log p-value:-2.564e+01
Information Content per bp:1.894
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.2 +/- 37.7bp
Average Position of motif in Background18.2 +/- 3.2bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:SCKAAAAGCCTGR
-----AAGCTTG-
 A T G C A G T C A C T G G T C A C G T A C G T A C G T A A C T G A G T C A G T C A C G T A C T G T C A G
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.59
Offset:5
Orientation:forward strand
Alignment:SCKAAAAGCCTGR
-----AGGCCTNG
 A T G C A G T C A C T G G T C A C G T A C G T A C G T A A C T G A G T C A G T C A C G T A C T G T C A G
A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.53
Offset:5
Orientation:forward strand
Alignment:SCKAAAAGCCTGR
-----AGGCCTAG
 A T G C A G T C A C T G G T C A C G T A C G T A C G T A A C T G A G T C A G T C A C G T A C T G T C A G
A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.52
Offset:5
Orientation:forward strand
Alignment:SCKAAAAGCCTGR
-----CAGCC---
 A T G C A G T C A C T G G T C A C G T A C G T A C G T A A C T G A G T C A G T C A C G T A C T G T C A G
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.51
Offset:4
Orientation:forward strand
Alignment:SCKAAAAGCCTGR
----TAATCCCN-
 A T G C A G T C A C T G G T C A C G T A C G T A C G T A A C T G A G T C A G T C A C G T A C T G T C A G
A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:6
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---SCKAAAAGCCTGR
GNCTATAAAAGG----
 A C G T A C G T A C G T A T G C A G T C A C T G G T C A C G T A C G T A C G T A A C T G A G T C A G T C A C G T A C T G T C A G
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.50
Offset:2
Orientation:forward strand
Alignment:SCKAAAAGCCTGR----
--CAAAGGCGTGGCCAG
 A T G C A G T C A C T G G T C A C G T A C G T A C G T A A C T G A G T C A G T C A C G T A C T G T C A G A C G T A C G T A C G T A C G T
A C G T A C G T A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.49
Offset:5
Orientation:forward strand
Alignment:SCKAAAAGCCTGR
-----TWGTCTGV
 A T G C A G T C A C T G G T C A C G T A C G T A C G T A A C T G A G T C A G T C A C G T A C T G T C A G
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.49
Offset:4
Orientation:forward strand
Alignment:SCKAAAAGCCTGR------
----ATTGCCTGAGGCAAT
 A T G C A G T C A C T G G T C A C G T A C G T A C G T A A C T G A G T C A G T C A C G T A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:10
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:SCKAAAAGCCTGR----
------TGCCTGAGGCN
 A T G C A G T C A C T G G T C A C G T A C G T A C G T A A C T G A G T C A G T C A C G T A C T G T C A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T