Information for 7-RRAMYCCAAGTTT (Motif 8)

C T A G C T G A C G T A G T C A A G C T G T A C A G T C C G T A C G T A A C T G A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A G T A C A C G T A C G T A C T G A C T G C T G A A C G T A C G T A G C T A G T C
p-value:1e-10
log p-value:-2.392e+01
Information Content per bp:1.872
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.5 +/- 25.1bp
Average Position of motif in Background25.8 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.63
Offset:6
Orientation:forward strand
Alignment:RRAMYCCAAGTTT
------CAAGCTT
 C T A G C T G A C G T A G T C A A G C T G T A C A G T C C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-RRAMYCCAAGTTT
AGAAACGAAAGT--
 A C G T C T A G C T G A C G T A G T C A A G C T G T A C A G T C C G T A C G T A A C T G A C G T A C G T A C G T
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----RRAMYCCAAGTTT
GGCAAAAGTCCAATAA-
 A C G T A C G T A C G T A C G T C T A G C T G A C G T A G T C A A G C T G T A C A G T C C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:RRAMYCCAAGTTT
---NNATAAGGNN
 C T A G C T G A C G T A G T C A A G C T G T A C A G T C C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

Znf423/MA0116.1/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:RRAMYCCAAGTTT--
GGCACCCAGGGGTGC
 C T A G C T G A C G T A G T C A A G C T G T A C A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:RRAMYCCAAGTTT
--AAGGCAAGTGT
 C T A G C T G A C G T A G T C A A G C T G T A C A G T C C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:RRAMYCCAAGTTT
---TGCCAA----
 C T A G C T G A C G T A G T C A A G C T G T A C A G T C C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:8
Score:0.50
Offset:4
Orientation:forward strand
Alignment:RRAMYCCAAGTTT-
----GGCACGTGTC
 C T A G C T G A C G T A G T C A A G C T G T A C A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:9
Score:0.49
Offset:5
Orientation:forward strand
Alignment:RRAMYCCAAGTTT----
-----SCHTGTTTACAT
 C T A G C T G A C G T A G T C A A G C T G T A C A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A G C G C T A C G A T C T A G A C G T C A G T C A G T G C T A A G T C G T C A G C A T

PB0201.1_Zfp281_2/Jaspar

Match Rank:10
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---RRAMYCCAAGTTT-
AGGAGACCCCCAATTTG
 A C G T A C G T A C G T C T A G C T G A C G T A G T C A A G C T G T A C A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G