Information for 9-GAGCAAAGTT (Motif 7)

A T C G C G T A A C T G T A G C G T C A G C T A G T C A A C T G C G A T A C G T
Reverse Opposite:
C G T A C G T A T G A C C A G T C G A T A C G T A C T G A G T C A C G T T A G C
p-value:1e-10
log p-value:-2.464e+01
Information Content per bp:1.827
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.13%
Number of Background Sequences with motif132.5
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets39.1 +/- 30.2bp
Average Position of motif in Background48.4 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.1/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GAGCAAAGTT--
AGAGTCCAAAGTCCA
 A C G T A C G T A C G T A T C G C G T A A C T G T A G C G T C A G C T A G T C A A C T G C G A T A C G T A C G T A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GAGCAAAGTT--
CANAGNNCAAAGTCCA
 A C G T A C G T A C G T A C G T A T C G C G T A A C T G T A G C G T C A G C T A G T C A A C T G C G A T A C G T A C G T A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GAGCAAAGTT--
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T A C G T A T C G C G T A A C T G T A G C G T C A G C T A G T C A A C T G C G A T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAGCAAAGTT
GGAACAAAGR-
 A C G T A T C G C G T A A C T G T A G C G T C A G C T A G T C A A C T G C G A T A C G T
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAGCAAAGTT
CAGCC-----
 A T C G C G T A A C T G T A G C G T C A G C T A G T C A A C T G C G A T A C G T
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAGCAAAGTT
AAAGATCAAAGG-
 A C G T A C G T A C G T A T C G C G T A A C T G T A G C G T C A G C T A G T C A A C T G C G A T A C G T
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GAGCAAAGTT---
NANAGATCAAAGGGNNN
 A C G T A C G T A C G T A C G T A T C G C G T A A C T G T A G C G T C A G C T A G T C A A C T G C G A T A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GAGCAAAGTT---
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T A C G T A T C G C G T A A C T G T A G C G T C A G C T A G T C A A C T G C G A T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAGCAAAGTT--
TAGGGCAAAGGTCA
 A C G T A C G T A T C G C G T A A C T G T A G C G T C A G C T A G T C A A C T G C G A T A C G T A C G T A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GAGCAAAGTT
CGGAGC------
 A C G T A C G T A T C G C G T A A C T G T A G C G T C A G C T A G T C A A C T G C G A T A C G T
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T