Information for 4-GATAATTTTTGTDAVT (Motif 5)

A C T G G T C A C G A T C T G A C G T A A G C T A C G T A C G T C G A T A C G T A C T G A C G T C G T A C G T A T A G C A G C T
Reverse Opposite:
C T G A A C T G C G A T G A C T C G T A G T A C C G T A C G T A C G T A C G T A C T G A A C G T A G C T C G T A A C G T A G T C
p-value:1e-11
log p-value:-2.640e+01
Information Content per bp:1.794
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.5 +/- 28.6bp
Average Position of motif in Background30.4 +/- 13.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dlx1/MA0879.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GATAATTTTTGTDAVT
NNTAATTANN------
 A C T G G T C A C G A T C T G A C G T A A G C T A C G T A C G T C G A T A C G T A C T G A C G T C G T A C G T A T A G C A G C T
T A C G T G C A C G A T T G C A G C T A C G A T A C G T C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GATAATTTTTGTDAVT
--TAATTGTTCTAAAC
 A C T G G T C A C G A T C T G A C G T A A G C T A C G T A C G T C G A T A C G T A C T G A C G T C G T A C G T A T A G C A G C T
A C G T A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PB0067.1_Sox18_1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GATAATTTTTGTDAVT
TTCAATTGTTCTAAAA
 A C T G G T C A C G A T C T G A C G T A A G C T A C G T A C G T C G A T A C G T A C T G A C G T C G T A C G T A T A G C A G C T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

PB0165.1_Sox11_2/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GATAATTTTTGTDAVT
-AAAATTGTTATGAA-
 A C T G G T C A C G A T C T G A C G T A A G C T A C G T A C G T C G A T A C G T A C T G A C G T C G T A C G T A T A G C A G C T
A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A A C G T

PH0092.1_Lhx2/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GATAATTTTTGTDAVT
NNNNNCTAATTAGTTTA---
 A C G T A C G T A C G T A C G T A C T G G T C A C G A T C T G A C G T A A G C T A C G T A C G T C G A T A C G T A C T G A C G T C G T A C G T A T A G C A G C T
A T C G C A G T A C G T G T A C T C G A G A T C G A C T G T C A C T G A A G C T A C G T C T G A C T A G A G C T C A G T A C G T G C T A A C G T A C G T A C G T

Lhx3/MA0135.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GATAATTTTTGTDAVT
GATTAATTAATTT----
 A C G T A C T G G T C A C G A T C T G A C G T A A G C T A C G T A C G T C G A T A C G T A C T G A C G T C G T A C G T A T A G C A G C T
T C A G C T G A G C A T C G A T C T G A C G T A A C G T C G A T C G T A C G T A C G A T A C G T G C A T A C G T A C G T A C G T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GATAATTTTTGTDAVT
NNNTTAATTGGTTTTT--
 A C G T A C G T A C T G G T C A C G A T C T G A C G T A A G C T A C G T A C G T C G A T A C G T A C T G A C G T C G T A C G T A T A G C A G C T
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T A C G T A C G T

PH0096.1_Lhx6_1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GATAATTTTTGTDAVT
GAGCGTTAATTAATGTA---
 A C G T A C G T A C G T A C G T A C T G G T C A C G A T C T G A C G T A A G C T A C G T A C G T C G A T A C G T A C T G A C G T C G T A C G T A T A G C A G C T
T A C G C G T A T C A G G T A C T C A G G A C T G A C T T C G A C T G A A G C T A G C T C T G A C T G A A C G T C A T G A G C T G C T A A C G T A C G T A C G T

HESX1/MA0894.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GATAATTTTTGTDAVT
GCTAATTGGC------
 A C T G G T C A C G A T C T G A C G T A A G C T A C G T A C G T C G A T A C G T A C T G A C G T C G T A C G T A T A G C A G C T
T C A G G A T C C G A T C T G A T C G A A C G T A G C T C T A G T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0186.1_Tcf3_2/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GATAATTTTTGTDAVT--
---NNTTTNTTTTNGNNN
 A C T G G T C A C G A T C T G A C G T A A G C T A C G T A C G T C G A T A C G T A C T G A C G T C G T A C G T A T A G C A G C T A C G T A C G T
A C G T A C G T A C G T C G T A C G A T A G C T C G A T A C G T C G A T C G A T C G A T A G C T G C A T T A G C A T C G T A C G A T G C G A C T