Information for 3-TSYRTTTCARAGA (Motif 8)

A C G T A T G C A G T C C T A G A C G T A C G T A C G T A G T C G C T A C T A G C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A G T C C G A T A C T G C G T A C G T A C G T A G A T C C T A G A T C G C G T A
p-value:1e-7
log p-value:-1.689e+01
Information Content per bp:1.866
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif4.49%
Number of Background Sequences with motif18.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets32.2 +/- 25.2bp
Average Position of motif in Background57.1 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TSYRTTTCARAGA--
---NTTTCTNAGAAA
 A C G T A T G C A G T C C T A G A C G T A C G T A C G T A G T C G C T A C T A G C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TSYRTTTCARAGA
-CGGTTTCAAA--
 A C G T A T G C A G T C C T A G A C G T A C G T A C G T A G T C G C T A C T A G C G T A A C T G C G T A
A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TSYRTTTCARAGA-
---ATTTCCAAGAA
 A C G T A T G C A G T C C T A G A C G T A C G T A C G T A G T C G C T A C T A G C G T A A C T G C G T A A C G T
A C G T A C G T A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TSYRTTTCARAGA
---ACATCAAAGG
 A C G T A T G C A G T C C T A G A C G T A C G T A C G T A G T C G C T A C T A G C G T A A C T G C G T A
A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TSYRTTTCARAGA-
----TTCCKNAGAA
 A C G T A T G C A G T C C T A G A C G T A C G T A C G T A G T C G C T A C T A G C G T A A C T G C G T A A C G T
A C G T A C G T A C G T A C G T G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A

Stat4/MA0518.1/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TSYRTTTCARAGA-----
----TTTCCAGGAAATGG
 A C G T A T G C A G T C C T A G A C G T A C G T A C G T A G T C G C T A C T A G C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

Stat6/MA0520.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TSYRTTTCARAGA---
-CATTTCCTGAGAAAT
 A C G T A T G C A G T C C T A G A C G T A C G T A C G T A G T C G C T A C T A G C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TSYRTTTCARAGA---
--NATTTCCNGGAAAT
 A C G T A T G C A G T C C T A G A C G T A C G T A C G T A G T C G C T A C T A G C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T

PB0005.1_Bbx_1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TSYRTTTCARAGA----
--TAATTCAATGAAGTG
 A C G T A T G C A G T C C T A G A C G T A C G T A C G T A G T C G C T A C T A G C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

PB0082.1_Tcf3_1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TSYRTTTCARAGA----
TATAGATCAAAGGAAAA
 A C G T A T G C A G T C C T A G A C G T A C G T A C G T A G T C G C T A C T A G C G T A A C T G C G T A A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A