Information for 3-GCTTTCCGTATCCBAG (Motif 5)

A C T G A G T C A C G T A C G T A C G T A G T C A G T C A C T G A C G T C G T A A C G T A G T C A G T C A C T G C T G A C T A G
Reverse Opposite:
A G T C A G C T T A G C A C T G A C T G C G T A C G A T G T C A G T A C C T A G A C T G G T C A G T C A C G T A A C T G A G T C
p-value:1e-8
log p-value:-2.071e+01
Information Content per bp:1.800
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif3.37%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.6 +/- 21.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF2/MA0051.1/Jaspar

Match Rank:1
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GCTTTCCGTATCCBAG
GTTTTGCTTTCACTTTCC---
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T A G T C A G T C A C T G A C G T C G T A A C G T A G T C A G T C A C T G C T G A C T A G
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCTTTCCGTATCCBAG
ACTTTCACTTTC----
 A C T G A G T C A C G T A C G T A C G T A G T C A G T C A C T G A C G T C G T A A C G T A G T C A G T C A C T G C T G A C T A G
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T A C G T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCTTTCCGTATCCBAG
RSTTTCRSTTTC----
 A C T G A G T C A C G T A C G T A C G T A G T C A G T C A C T G A C G T C G T A A C G T A G T C A G T C A C T G C T G A C T A G
T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C A C G T A C G T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCTTTCCGTATCCBAG
TCAGTTTCATTTTCC---
 A C G T A C G T A C T G A G T C A C G T A C G T A C G T A G T C A G T C A C T G A C G T C G T A A C G T A G T C A G T C A C T G C T G A C T A G
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCTTTCCGTATCCBAG
AGTTTCAGTTTC----
 A C T G A G T C A C G T A C G T A C G T A G T C A G T C A C T G A C G T C G T A A C G T A G T C A G T C A C T G C T G A C T A G
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCTTTCCGTATCCBAG---
--NTNNCGTATCCAAGTNN
 A C T G A G T C A C G T A C G T A C G T A G T C A G T C A C T G A C G T C G T A A C G T A G T C A G T C A C T G C T G A C T A G A C G T A C G T A C G T
A C G T A C G T C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCTTTCCGTATCCBAG
AGTTTCAKTTTC----
 A C T G A G T C A C G T A C G T A C G T A G T C A G T C A C T G A C G T C G T A A C G T A G T C A G T C A C T G C T G A C T A G
C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C A C G T A C G T A C G T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCTTTCCGTATCCBAG
ASTTTCASTTYC----
 A C T G A G T C A C G T A C G T A C G T A G T C A G T C A C T G A C G T C G T A A C G T A G T C A G T C A C T G C T G A C T A G
C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C A C G T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCTTTCCGTATCCBAG
TCACTTTCACTTTCN---
 A C G T A C G T A C T G A G T C A C G T A C G T A C G T A G T C A G T C A C T G A C G T C G T A A C G T A G T C A G T C A C T G C T G A C T A G
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTCCGTATCCBAG
NGCTN------------
 A C G T A C T G A G T C A C G T A C G T A C G T A G T C A G T C A C T G A C G T C G T A A C G T A G T C A G T C A C T G C T G A C T A G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T