Information for 2-WTAMCWAGAG (Motif 7)

C G T A A C G T C G T A G T A C A G T C C G A T C G T A A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A C G T C G T A A C T G C A T G A C G T C G T A C G A T
p-value:1e-3
log p-value:-8.995e+00
Information Content per bp:1.874
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif99.7
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets29.2 +/- 25.2bp
Average Position of motif in Background56.9 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0040.1_Hmbox1/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----WTAMCWAGAG---
GANGTTAACTAGTTTNN
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A G T A C A G T C C G A T C G T A A C T G C G T A A C T G A C G T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

PB0139.1_Irf5_2/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-WTAMCWAGAG----
TTGACCGAGAATTCC
 A C G T C G T A A C G T C G T A G T A C A G T C C G A T C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

LBX1/MA0618.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:WTAMCWAGAG
TTAATTAG--
 C G T A A C G T C G T A G T A C A G T C C G A T C G T A A C T G C G T A A C T G
C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-WTAMCWAGAG
GTTAACTAGN-
 A C G T C G T A A C G T C G T A G T A C A G T C C G A T C G T A A C T G C G T A A C T G
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-WTAMCWAGAG----
NNNACCGAGAGTNNN
 A C G T C G T A A C G T C G T A G T A C A G T C C G A T C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----WTAMCWAGAG--
AGCTGTTAACTAGCCGT
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A G T A C A G T C C G A T C G T A A C T G C G T A A C T G A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

PB0119.1_Foxa2_2/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----WTAMCWAGAG-
AAAAATAACAAACGG
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A G T A C A G T C C G A T C G T A A C T G C G T A A C T G A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0081.1_Tcf1_1/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------WTAMCWAGAG-
ACTTAGTTAACTAAAAA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A G T A C A G T C C G A T C G T A A C T G C G T A A C T G A C G T
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

PH0167.1_Tcf1/Jaspar

Match Rank:9
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------WTAMCWAGAG-
CCTTAGTTAACTAAAAT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A G T A C A G T C C G A T C G T A A C T G C G T A A C T G A C G T
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-WTAMCWAGAG
ATTTCCAAGAA
 A C G T C G T A A C G T C G T A G T A C A G T C C G A T C G T A A C T G C G T A A C T G
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A