Information for 3-AAAAAAAMAACAA (Motif 6)

C T G A G T C A G C T A C G T A C G T A T C G A C G T A T G A C G T C A C G T A G T A C G T C A G T C A
Reverse Opposite:
A C G T A C G T C A T G G C A T A C G T A C T G C G A T A G C T G C A T G C A T C G A T A C G T G A C T
p-value:1e-5
log p-value:-1.182e+01
Information Content per bp:1.661
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif17.95%
Number of Background Sequences with motif910.9
Percentage of Background Sequences with motif1.88%
Average Position of motif in Targets49.0 +/- 33.9bp
Average Position of motif in Background48.0 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----AAAAAAAMAACAA
GTTAAAAAAAAAAATTA
 A C G T A C G T A C G T A C G T C T G A G T C A G C T A C G T A C G T A T C G A C G T A T G A C G T C A C G T A G T A C G T C A G T C A
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:AAAAAAAMAACAA---
-AACAAACAACAAGAG
 C T G A G T C A G C T A C G T A C G T A T C G A C G T A T G A C G T C A C G T A G T A C G T C A G T C A A C G T A C G T A C G T
A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0122.1_Foxk1_2/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AAAAAAAMAACAA--
CAAACAACAACACCT
 C T G A G T C A G C T A C G T A C G T A T C G A C G T A T G A C G T C A C G T A G T A C G T C A G T C A A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAAMAACAA
GTTCAAAAAAAAAATTC-
 A C G T A C G T A C G T A C G T A C G T C T G A G T C A G C T A C G T A C G T A T C G A C G T A T G A C G T C A C G T A G T A C G T C A G T C A
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C A C G T

PB0186.1_Tcf3_2/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAAMAACAA
AGCCGAAAAAAAAAT---
 A C G T A C G T A C G T A C G T A C G T C T G A G T C A G C T A C G T A C G T A T C G A C G T A T G A C G T C A C G T A G T A C G T C A G T C A
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T A C G T A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AAAAAAAMAACAA-
ATATCAAAACAAAACA
 A C G T A C G T C T G A G T C A G C T A C G T A C G T A T C G A C G T A T G A C G T C A C G T A G T A C G T C A G T C A A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAAMAACAA
TACTGGAAAAAAAA----
 A C G T A C G T A C G T A C G T A C G T C T G A G T C A G C T A C G T A C G T A T C G A C G T A T G A C G T C A C G T A G T A C G T C A G T C A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AAAAAAAMAACAA
AAACAAACATTC-
 C T G A G T C A G C T A C G T A C G T A T C G A C G T A T G A C G T C A C G T A G T A C G T C A G T C A
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AAAAAAAMAACAA----
--AAAAATAACAAACGG
 C T G A G T C A G C T A C G T A C G T A T C G A C G T A T G A C G T C A C G T A G T A C G T C A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0148.1_Mtf1_2/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAAAAAAMAACAA--
-AAATAAGAAAAAAC
 C T G A G T C A G C T A C G T A C G T A T C G A C G T A T G A C G T C A C G T A G T A C G T C A G T C A A C G T A C G T
A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C