Information for 3-AGGAGAGAGMCASTSG (Motif 8)

C T G A T C A G A T C G C G T A A C T G C T G A C T A G C G T A T C A G G T A C T G A C G C T A A T G C A G C T A T C G A C T G
Reverse Opposite:
T A G C A T G C C T G A A T C G C A G T A C T G A C T G A G T C A C G T A G T C A G C T A G T C A C G T A T G C A G T C G A C T
p-value:1e-8
log p-value:-2.006e+01
Information Content per bp:1.686
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif5.75%
Number of Background Sequences with motif27.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets42.8 +/- 28.0bp
Average Position of motif in Background47.3 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6/MA0471.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGGAGAGAGMCASTSG
GGGCGGGAAGG-----
 C T G A T C A G A T C G C G T A A C T G C T G A C T A G C G T A T C A G G T A C T G A C G C T A A T G C A G C T A T C G A C T G
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGGAGAGAGMCASTSG
AGGTGNCAGACAG---
 C T G A T C A G A T C G C G T A A C T G C T G A C T A G C G T A T C A G G T A C T G A C G C T A A T G C A G C T A T C G A C T G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGGAGAGAGMCASTSG
-GGCGGGAARN-----
 C T G A T C A G A T C G C G T A A C T G C T G A C T A G C G T A T C A G G T A C T G A C G C T A A T G C A G C T A T C G A C T G
A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGGAGAGAGMCASTSG
GAAAGTGAAAGT------
 A C G T A C G T C T G A T C A G A T C G C G T A A C T G C T G A C T A G C G T A T C A G G T A C T G A C G C T A A T G C A G C T A T C G A C T G
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGGAGAGAGMCASTSG
AGGTGHCAGACA----
 C T G A T C A G A T C G C G T A A C T G C T G A C T A G C G T A T C A G G T A C T G A C G C T A A T G C A G C T A T C G A C T G
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGGAGAGAGMCASTSG
GGGCGGGAAGG-----
 C T G A T C A G A T C G C G T A A C T G C T G A C T A G C G T A T C A G G T A C T G A C G C T A A T G C A G C T A T C G A C T G
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AGGAGAGAGMCASTSG
BTKGGCGGGAAA------
 A C G T A C G T C T G A T C A G A T C G C G T A A C T G C T G A C T A G C G T A T C A G G T A C T G A C G C T A A T G C A G C T A T C G A C T G
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGGAGAGAGMCASTSG
AGGTGTGA--------
 C T G A T C A G A T C G C G T A A C T G C T G A C T A G C G T A T C A G G T A C T G A C G C T A A T G C A G C T A T C G A C T G
C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AGGAGAGAGMCASTSG
AGGTGTGA--------
 C T G A T C A G A T C G C G T A A C T G C T G A C T A G C G T A T C A G G T A C T G A C G C T A A T G C A G C T A T C G A C T G
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AGGAGAGAGMCASTSG
AGGTGTGA--------
 C T G A T C A G A T C G C G T A A C T G C T G A C T A G C G T A T C A G G T A C T G A C G C T A A T G C A G C T A T C G A C T G
C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T