Information for 1-KASWTTTKTTTRA (Motif 4)

A C G T C G T A A T G C C G T A A C G T A C G T A G C T A C G T A C G T A C G T A C G T T C A G C G T A
Reverse Opposite:
A C G T A G C T C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G A T A T C G A C G T G T C A
p-value:1e-8
log p-value:-2.064e+01
Information Content per bp:1.846
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif10.20%
Number of Background Sequences with motif42.2
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets35.6 +/- 19.9bp
Average Position of motif in Background47.7 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-KASWTTTKTTTRA---
NNNNTTTTTTTTTNAAC
 A C G T A C G T C G T A A T G C C G T A A C G T A C G T A G C T A C G T A C G T A C G T A C G T T C A G C G T A A C G T A C G T A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:KASWTTTKTTTRA---
--TTTTTTTTCNNGTN
 A C G T C G T A A T G C C G T A A C G T A C G T A G C T A C G T A C G T A C G T A C G T T C A G C G T A A C G T A C G T A C G T
A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

PB0116.1_Elf3_2/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-KASWTTTKTTTRA---
GNATTTTTTTTTTGANC
 A C G T A C G T C G T A A T G C C G T A A C G T A C G T A G C T A C G T A C G T A C G T A C G T T C A G C G T A A C G T A C G T A C G T
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

PB0016.1_Foxj1_1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:KASWTTTKTTTRA---
NNNNTTTGTTTACNNT
 A C G T C G T A A T G C C G T A A C G T A C G T A G C T A C G T A C G T A C G T A C G T T C A G C G T A A C G T A C G T A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

FOXP1/MA0481.1/Jaspar

Match Rank:5
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:KASWTTTKTTTRA-----
---CTTTGTTTACTTTTN
 A C G T C G T A A T G C C G T A A C G T A C G T A G C T A C G T A C G T A C G T A C G T T C A G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:KASWTTTKTTTRA
--CCTTTGTTTT-
 A C G T C G T A A T G C C G T A A C G T A C G T A G C T A C G T A C G T A C G T A C G T T C A G C G T A
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:KASWTTTKTTTRA-----
-NNNTTTGTTTACNTTNN
 A C G T C G T A A T G C C G T A A C G T A C G T A G C T A C G T A C G T A C G T A C G T T C A G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:KASWTTTKTTTRA-----
-NNNTTTGTTTACNTTNN
 A C G T C G T A A T G C C G T A A C G T A C G T A G C T A C G T A C G T A C G T A C G T T C A G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

SRY/MA0084.1/Jaspar

Match Rank:9
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:KASWTTTKTTTRA
----ATTGTTTAN
 A C G T C G T A A T G C C G T A A C G T A C G T A G C T A C G T A C G T A C G T A C G T T C A G C G T A
A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

PB0093.1_Zfp105_1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-KASWTTTKTTTRA-
NTNTTGTTGTTTGTN
 A C G T A C G T C G T A A T G C C G T A A C G T A C G T A G C T A C G T A C G T A C G T A C G T T C A G C G T A A C G T
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T