Information for 2-GKAWYWYSYTCTYCTM (Motif 3)

A C T G A C G T C G T A C G A T A G T C C G A T A G T C A T G C A G C T A C G T A G T C A C G T A G C T A G T C A C G T G T A C
Reverse Opposite:
A C T G C G T A A C T G C T G A C G T A A C T G C G T A C T G A T A C G T C A G C G A T C T A G C G A T A C G T G T C A G T A C
p-value:1e-9
log p-value:-2.196e+01
Information Content per bp:1.785
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif8.16%
Number of Background Sequences with motif9.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets36.8 +/- 27.0bp
Average Position of motif in Background30.5 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.53
Offset:9
Orientation:forward strand
Alignment:GKAWYWYSYTCTYCTM
---------GCTTCC-
 A C T G A C G T C G T A C G A T A G T C C G A T A G T C A T G C A G C T A C G T A G T C A C G T A G C T A G T C A C G T G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:2
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GKAWYWYSYTCTYCTM
-GAACADWATGTTCTT
 A C T G A C G T C G T A C G A T A G T C C G A T A G T C A T G C A G C T A C G T A G T C A C G T A G C T A G T C A C G T G T A C
A C G T C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

NR3C2/MA0727.1/Jaspar

Match Rank:3
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GKAWYWYSYTCTYCTM
GGGAACATTGTGTTCCC
 A C G T A C T G A C G T C G T A C G A T A G T C C G A T A G T C A T G C A G C T A C G T A G T C A C G T A G C T A G T C A C G T G T A C
C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C

NR3C1/MA0113.3/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GKAWYWYSYTCTYCTM
NGGAACATNATGTACCC
 A C G T A C T G A C G T C G T A C G A T A G T C C G A T A G T C A T G C A G C T A C G T A G T C A C G T A G C T A G T C A C G T G T A C
C A T G C T A G C T A G C G T A T G C A T A G C C T G A G A C T G C A T C T G A G A C T A T C G G C A T G C T A G A T C G A T C G A T C

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GKAWYWYSYTCTYCTM
NAGAACAGNCTGTNCT-
 A C G T A C T G A C G T C G T A C G A T A G T C C G A T A G T C A T G C A G C T A C G T A G T C A C G T A G C T A G T C A C G T G T A C
T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A C G T

Ar/MA0007.3/Jaspar

Match Rank:6
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GKAWYWYSYTCTYCTM
GGGAACACGGTGTACCC
 A C G T A C T G A C G T C G T A C G A T A G T C C G A T A G T C A T G C A G C T A C G T A G T C A C G T A G C T A G T C A C G T G T A C
C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GKAWYWYSYTCTYCTM
AGNACANNNTGTNCTN
 A C T G A C G T C G T A C G A T A G T C C G A T A G T C A T G C A G C T A C G T A G T C A C G T A G C T A G T C A C G T G T A C
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:GKAWYWYSYTCTYCTM
-GRACAGWMTGTYCTB
 A C T G A C G T C G T A C G A T A G T C C G A T A G T C A T G C A G C T A C G T A G T C A C G T A G C T A G T C A C G T G T A C
A C G T C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:9
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:GKAWYWYSYTCTYCTM
-GVACAGNMTGTYCTB
 A C T G A C G T C G T A C G A T A G T C C G A T A G T C A T G C A G C T A C G T A G T C A C G T A G C T A G T C A C G T G T A C
A C G T C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

SPIB/MA0081.1/Jaspar

Match Rank:10
Score:0.46
Offset:8
Orientation:reverse strand
Alignment:GKAWYWYSYTCTYCTM
--------TTCCTCT-
 A C T G A C G T C G T A C G A T A G T C C G A T A G T C A T G C A G C T A C G T A G T C A C G T A G C T A G T C A C G T G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T