Information for 9-GACCTCGGAGAGG (Motif 9)

A C T G G T C A G A T C A G T C A G C T G T A C T A C G A C T G C G T A C T A G C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A G T C A C G T A G T C A T G C A C T G C T G A A C T G C T A G A C G T A G T C
p-value:1e-9
log p-value:-2.082e+01
Information Content per bp:1.841
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif15.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets51.6 +/- 30.7bp
Average Position of motif in Background58.0 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GACCTCGGAGAGG---
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A C G T A C G T A C T G G T C A G A T C A G T C A G C T G T A C T A C G A C T G C G T A C T A G C G T A A C T G A C T G A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GACCTCGGAGAGG
CTGACCTTTG-----
 A C G T A C G T A C T G G T C A G A T C A G T C A G C T G T A C T A C G A C T G C G T A C T A G C G T A A C T G A C T G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T A C G T

ZBTB7B/MA0694.1/Jaspar

Match Rank:3
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GACCTCGGAGAGG
GCGACCACCGAA---
 A C G T A C G T A C T G G T C A G A T C A G T C A G C T G T A C T A C G A C T G C G T A C T A G C G T A A C T G A C T G
C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A A C G T A C G T A C G T

RARA::RXRA/MA0159.1/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GACCTCGGAGAGG---
AGGTCACGGAGAGGTCA
 A C G T A C T G G T C A G A T C A G T C A G C T G T A C T A C G A C T G C G T A C T A G C G T A A C T G A C T G A C G T A C G T A C G T
C T G A A C T G C A T G A C G T A T G C C T G A A G C T T A C G T C A G C T G A T A C G T C G A A C T G A C T G C A G T A T G C C G T A

PB0140.1_Irf6_2/Jaspar

Match Rank:5
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GACCTCGGAGAGG---
-NNNACCGAGAGTNNN
 A C T G G T C A G A T C A G T C A G C T G T A C T A C G A C T G C G T A C T A G C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GACCTCGGAGAGG
TGACCYCT------
 A C G T A C T G G T C A G A T C A G T C A G C T G T A C T A C G A C T G C G T A C T A G C G T A A C T G A C T G
A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GACCTCGGAGAGG
TGACCT--------
 A C G T A C T G G T C A G A T C A G T C A G C T G T A C T A C G A C T G C G T A C T A G C G T A A C T G A C T G
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GACCTCGGAGAGG-
CACCCCCGGGGGGG
 A C T G G T C A G A T C A G T C A G C T G T A C T A C G A C T G C G T A C T A G C G T A A C T G A C T G A C G T
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:9
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----GACCTCGGAGAGG---
TCAGCACCATGGACAGCTCC
 A C G T A C G T A C G T A C G T A C T G G T C A G A T C A G T C A G C T G T A C T A C G A C T G C G T A C T A G C G T A A C T G A C T G A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

PB0114.1_Egr1_2/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GACCTCGGAGAGG------
---TGCGGAGTGGGACTGG
 A C T G G T C A G A T C A G T C A G C T G T A C T A C G A C T G C G T A C T A G C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G