Information for 13-TTTTTAAAAAWGA (Motif 12)

A C G T A G C T C G A T A G C T C G A T G C T A C T G A C G T A C T G A T C G A C G A T C T A G C T G A
Reverse Opposite:
G A C T G A T C G C T A A G C T A G C T C G A T A G C T C G A T C G T A C T G A C G T A T C G A G T C A
p-value:1e-6
log p-value:-1.395e+01
Information Content per bp:1.646
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.75%
Number of Background Sequences with motif182.0
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets53.0 +/- 29.3bp
Average Position of motif in Background50.3 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTTTTAAAAAWGA
CCGTATTATAAACAA
 A C G T A C G T A C G T A G C T C G A T A G C T C G A T G C T A C T G A C G T A C T G A T C G A C G A T C T A G C T G A
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TTTTTAAAAAWGA
--TTTGAAACCG-
 A C G T A G C T C G A T A G C T C G A T G C T A C T G A C G T A C T G A T C G A C G A T C T A G C T G A
A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTTTTAAAAAWGA
-NATTCAAAT---
 A C G T A G C T C G A T A G C T C G A T G C T A C T G A C G T A C T G A T C G A C G A T C T A G C T G A
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTTTTAAAAAWGA
AATATTAATAAAGA
 A C G T A C G T A G C T C G A T A G C T C G A T G C T A C T G A C G T A C T G A T C G A C G A T C T A G C T G A
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

PB0182.1_Srf_2/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTTTTAAAAAWGA----
GTTAAAAAAAAAAATTA
 A C G T A G C T C G A T A G C T C G A T G C T A C T G A C G T A C T G A T C G A C G A T C T A G C T G A A C G T A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0080.1_Tbp_1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTAAAAAWGA
NANTTATATATAANGN
 A C G T A C G T A C G T A C G T A G C T C G A T A G C T C G A T G C T A C T G A C G T A C T G A T C G A C G A T C T A G C T G A
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

PB0116.1_Elf3_2/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTTTTAAAAAWGA----
GTTCAAAAAAAAAATTC
 A C G T A G C T C G A T A G C T C G A T G C T A C T G A C G T A C T G A T C G A C G A T C T A G C T G A A C G T A C G T A C G T A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

PB0145.1_Mafb_2/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTTTTAAAAAWGA
CAATTGCAAAAATAT
 A C G T A C G T A C G T A G C T C G A T A G C T C G A T G C T A C T G A C G T A C T G A T C G A C G A T C T A G C T G A
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

PB0148.1_Mtf1_2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTTTTAAAAAWGA
AAATAAGAAAAAAC-
 A C G T A C G T A C G T A G C T C G A T A G C T C G A T G C T A C T G A C G T A C T G A T C G A C G A T C T A G C T G A
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTTTTAAAAAWGA
TTTCTNAGAAAN--
 A C G T A C G T A G C T C G A T A G C T C G A T G C T A C T G A C G T A C T G A T C G A C G A T C T A G C T G A
A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T A C G T A C G T