Information for 7-AGGGTTGGCATST (Motif 6)

C T G A C T A G A C T G A C T G A C G T A C G T C T A G A T C G A T G C G T C A A G C T T A G C C G A T
Reverse Opposite:
C G T A A T C G C T G A A C G T A T C G A T G C A G T C C G T A T G C A G T A C A G T C A G T C A G C T
p-value:1e-10
log p-value:-2.379e+01
Information Content per bp:1.770
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.9 +/- 32.7bp
Average Position of motif in Background35.2 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--AGGGTTGGCATST-
NGTAGGTTGGCATNNN
 A C G T A C G T C T G A C T A G A C T G A C T G A C G T A C G T C T A G A T C G A T G C G T C A A G C T T A G C C G A T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:AGGGTTGGCATST
--GGTTGGCAT--
 C T G A C T A G A C T G A C T G A C G T A C G T C T A G A T C G A T G C G T C A A G C T T A G C C G A T
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:AGGGTTGGCATST
---NTTGGCANN-
 C T G A C T A G A C T G A C T G A C G T A C G T C T A G A T C G A T G C G T C A A G C T T A G C C G A T
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:AGGGTTGGCATST
--NNTTGGCANN-
 C T G A C T A G A C T G A C T G A C G T A C G T C T A G A T C G A T G C G T C A A G C T T A G C C G A T
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.71
Offset:4
Orientation:forward strand
Alignment:AGGGTTGGCATST
----TTGGCA---
 C T G A C T A G A C T G A C T G A C G T A C G T C T A G A T C G A T G C G T C A A G C T T A G C C G A T
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AGGGTTGGCATST
--NGTGGGCAT--
 C T G A C T A G A C T G A C T G A C G T A C G T C T A G A T C G A T G C G T C A A G C T T A G C C G A T
A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:AGGGTTGGCATST
---CTTGGCAA--
 C T G A C T A G A C T G A C T G A C G T A C G T C T A G A T C G A T G C G T C A A G C T T A G C C G A T
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGGGTTGGCATST
TGGGTGTGGC----
 A C G T C T G A C T A G A C T G A C T G A C G T A C G T C T A G A T C G A T G C G T C A A G C T T A G C C G A T
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGGGTTGGCATST
NTGGGTGTGGCC---
 A C G T A C G T C T G A C T A G A C T G A C T G A C G T A C G T C T A G A T C G A T G C G T C A A G C T T A G C C G A T
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGGGTTGGCATST
DGGGYGKGGC----
 A C G T C T G A C T A G A C T G A C T G A C G T A C G T C T A G A T C G A T G C G T C A A G C T T A G C C G A T
C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T