Information for 8-TGAAGTACTA (Motif 5)

C A G T A C T G G C T A C G T A A C T G G C A T C G T A T G A C C G A T C T G A
Reverse Opposite:
G A C T C G T A A C T G G C A T C G T A T G A C G C A T C A G T G T A C G T C A
p-value:1e-11
log p-value:-2.600e+01
Information Content per bp:1.677
Number of Target Sequences with motif69.0
Percentage of Target Sequences with motif7.58%
Number of Background Sequences with motif1419.8
Percentage of Background Sequences with motif2.99%
Average Position of motif in Targets46.8 +/- 29.0bp
Average Position of motif in Background51.0 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0116.1_Nkx2-9/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TGAAGTACTA----
NATTTAAGTACTTNAAA
 A C G T A C G T A C G T C A G T A C T G G C T A C G T A A C T G G C A T C G T A T G A C C G A T C T G A A C G T A C G T A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

PH0117.1_Nkx3-1/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TGAAGTACTA----
NATTTAAGTACTTANNA
 A C G T A C G T A C G T C A G T A C T G G C T A C G T A A C T G G C A T C G T A T G A C C G A T C T G A A C G T A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

PH0112.1_Nkx2-3/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TGAAGTACTA----
CTTTAAGTACTTAATG
 A C G T A C G T C A G T A C T G G C T A C G T A A C T G G C A T C G T A T G A C C G A T C T G A A C G T A C G T A C G T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TGAAGTACTA----
ACTCCAAGTACTTGGAA
 A C G T A C G T A C G T C A G T A C T G G C T A C G T A A C T G G C A T C G T A T G A C C G A T C T G A A C G T A C G T A C G T A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

JUN/MA0488.1/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TGAAGTACTA
AAGATGATGTCAT-
 A C G T A C G T A C G T A C G T C A G T A C T G G C T A C G T A A C T G G C A T C G T A T G A C C G A T C T G A
C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGAAGTACTA
NGAAGC----
 C A G T A C T G G C T A C G T A A C T G G C A T C G T A T G A C C G A T C T G A
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGAAGTACTA
TGACGT----
 C A G T A C T G G C T A C G T A A C T G G C A T C G T A T G A C C G A T C T G A
A C G T C A T G C G T A A G T C A C T G G A C T A C G T A C G T A C G T A C G T

Atf1/MA0604.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGAAGTACTA
ATGACGTA---
 A C G T C A G T A C T G G C T A C G T A A C T G G C A T C G T A T G A C C G A T C T G A
T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGAAGTACTA
TTAAGTGCTT
 C A G T A C T G G C T A C G T A A C T G G C A T C G T A T G A C C G A T C T G A
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGAAGTACTA
NTCAAGTGG--
 A C G T C A G T A C T G G C T A C G T A A C T G G C A T C G T A T G A C C G A T C T G A
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T