Information for 5-GACCTTRCTAKTT (Motif 9)

A C T G C T G A G T A C G T A C C G A T C G A T T C G A A G T C G A C T C T G A C A G T G A C T C A G T
Reverse Opposite:
G T C A C T G A G T C A G A C T C G T A C T A G A G C T G C T A C G T A A C T G A C T G A G C T T G A C
p-value:1e-8
log p-value:-1.867e+01
Information Content per bp:1.598
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif13.10%
Number of Background Sequences with motif595.3
Percentage of Background Sequences with motif1.23%
Average Position of motif in Targets51.5 +/- 25.4bp
Average Position of motif in Background49.9 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrrg/MA0643.1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GACCTTRCTAKTT
ATGACCTTGA-----
 A C G T A C G T A C T G C T G A G T A C G T A C C G A T C G A T T C G A A G T C G A C T C T G A C A G T G A C T C A G T
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GACCTTRCTAKTT
TGACCTTGAT----
 A C G T A C T G C T G A G T A C G T A C C G A T C G A T T C G A A G T C G A C T C T G A C A G T G A C T C A G T
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GACCTTRCTAKTT
BNTGDCCTTG------
 A C G T A C G T A C G T A C T G C T G A G T A C G T A C C G A T C G A T T C G A A G T C G A C T C T G A C A G T G A C T C A G T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GACCTTRCTAKTT
NTGACCTTGA-----
 A C G T A C G T A C T G C T G A G T A C G T A C C G A T C G A T T C G A A G T C G A C T C T G A C A G T G A C T C A G T
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GACCTTRCTAKTT
TTGACCTANTTATN-
 A C G T A C G T A C T G C T G A G T A C G T A C C G A T C G A T T C G A A G T C G A C T C T G A C A G T G A C T C A G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GACCTTRCTAKTT
NNGCACCTTTCTCC--
 A C G T A C G T A C G T A C T G C T G A G T A C G T A C C G A T C G A T T C G A A G T C G A C T C T G A C A G T G A C T C A G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GACCTTRCTAKTT
TGACCTARTT----
 A C G T A C T G C T G A G T A C G T A C C G A T C G A T T C G A A G T C G A C T C T G A C A G T G A C T C A G T
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GACCTTRCTAKTT
NNNNATGACCTTGANTN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A G T A C G T A C C G A T C G A T T C G A A G T C G A C T C T G A C A G T G A C T C A G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:9
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GACCTTRCTAKTT-------
-----TTCTATTTTTAGNNN
 A C T G C T G A G T A C G T A C C G A T C G A T T C G A A G T C G A C T C T G A C A G T G A C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GACCTTRCTAKTT
GTGACCTT-------
 A C G T A C G T A C T G C T G A G T A C G T A C C G A T C G A T T C G A A G T C G A C T C T G A C A G T G A C T C A G T
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T