Information for 4-TRGAAKGATYKAR (Motif 7)

A G C T C T A G A C T G C G T A C T G A A C T G A C T G C G T A A C G T A G T C A C G T C G T A C T A G
Reverse Opposite:
A G T C A C G T G T C A C T A G C G T A A C G T A G T C G T A C A G C T A C G T A G T C G A C T C T G A
p-value:1e-9
log p-value:-2.090e+01
Information Content per bp:1.841
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif3.57%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets86.0 +/- 4.3bp
Average Position of motif in Background43.9 +/- 16.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TRGAAKGATYKAR--
TAGAANVTTCTAGAA
 A G C T C T A G A C T G C G T A C T G A A C T G A C T G C G T A A C G T A G T C A C G T C G T A C T A G A C G T A C G T
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TRGAAKGATYKAR--
NNTTCTGGAANNTTCTAGAA
 A C G T A C G T A C G T A C G T A C G T A G C T C T A G A C T G C G T A C T G A A C T G A C T G C G T A A C G T A G T C A C G T C G T A C T A G A C G T A C G T
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A

PBX1/MA0070.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TRGAAKGATYKAR
TTTGATTGATGN--
 A C G T A G C T C T A G A C T G C G T A C T G A A C T G A C T G C G T A A C G T A G T C A C G T C G T A C T A G
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G A C G T A C G T

HSF4/MA0771.1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TRGAAKGATYKAR--
--GAANNTTCTAGAA
 A G C T C T A G A C T G C G T A C T G A A C T G A C T G C G T A A C G T A G T C A C G T C G T A C T A G A C G T A C G T
A C G T A C G T T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A

HSF1/MA0486.2/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TRGAAKGATYKAR--
--GAACGTTCTAGAA
 A G C T C T A G A C T G C G T A C T G A A C T G A C T G C G T A A C G T A G T C A C G T C G T A C T A G A C G T A C G T
A C G T A C G T C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A

HSF2/MA0770.1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TRGAAKGATYKAR--
--GAANGTTCTAGAA
 A G C T C T A G A C T G C G T A C T G A A C T G A C T G C G T A A C G T A G T C A C G T C G T A C T A G A C G T A C G T
A C G T A C G T T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TRGAAKGATYKAR
NCTGGAATGC-----
 A C G T A C G T A G C T C T A G A C T G C G T A C T G A A C T G A C T G C G T A A C G T A G T C A C G T C G T A C T A G
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T A C G T A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TRGAAKGATYKAR
TGGAATGT-----
 A G C T C T A G A C T G C G T A C T G A A C T G A C T G C G T A A C G T A G T C A C G T C G T A C T A G
G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T A C G T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TRGAAKGATYKAR
---ATTGATTYND
 A G C T C T A G A C T G C G T A C T G A A C T G A C T G C G T A A C G T A G T C A C G T C G T A C T A G
A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

TEAD1/MA0090.2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TRGAAKGATYKAR
NTGGAATGTG----
 A C G T A G C T C T A G A C T G C G T A C T G A A C T G A C T G C G T A A C G T A G T C A C G T C G T A C T A G
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T A C G T A C G T