Information for 4-GHDGHGGGATCCHGCD (Motif 5)

C T A G G A C T C A G T A C T G G C T A C T A G A C T G A C T G C G T A A C G T A G T C A G T C G C T A A C T G A T G C C G T A
Reverse Opposite:
G A C T A T C G A G T C C A G T C T A G C T A G G T C A A C G T A G T C A G T C A G T C C A G T A G T C G C T A C T G A A G T C
p-value:1e-9
log p-value:-2.152e+01
Information Content per bp:1.735
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif4.76%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.7 +/- 24.7bp
Average Position of motif in Background29.7 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GHDGHGGGATCCHGCD
--GGCGGGAARN----
 C T A G G A C T C A G T A C T G G C T A C T A G A C T G A C T G C G T A A C G T A G T C A G T C G C T A A C T G A T G C C G T A
A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GHDGHGGGATCCHGCD
-GGGCGGGAAGG----
 C T A G G A C T C A G T A C T G G C T A C T A G A C T G A C T G C G T A A C G T A G T C A G T C G C T A A C T G A T G C C G T A
A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GHDGHGGGATCCHGCD
CWGGCGGGAA------
 C T A G G A C T C A G T A C T G G C T A C T A G A C T G A C T G C G T A A C G T A G T C A G T C G C T A A C T G A T G C C G T A
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GHDGHGGGATCCHGCD
-GGGCGGGACC-----
 C T A G G A C T C A G T A C T G G C T A C T A G A C T G A C T G C G T A A C G T A G T C A G T C G C T A A C T G A T G C C G T A
A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GHDGHGGGATCCHGCD
BTKGGCGGGAAA-----
 A C G T C T A G G A C T C A G T A C T G G C T A C T A G A C T G A C T G C G T A A C G T A G T C A G T C G C T A A C T G A T G C C G T A
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GHDGHGGGATCCHGCD
-GGGCGGGAAGG----
 C T A G G A C T C A G T A C T G G C T A C T A G A C T G A C T G C G T A A C G T A G T C A G T C G C T A A C T G A T G C C G T A
A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GHDGHGGGATCCHGCD
TGCGGAGTGGGACTGG---
 A C G T A C G T A C G T C T A G G A C T C A G T A C T G G C T A C T A G A C T G A C T G C G T A A C G T A G T C A G T C G C T A A C T G A T G C C G T A
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GHDGHGGGATCCHGCD
-----CGGAGC-----
 C T A G G A C T C A G T A C T G G C T A C T A G A C T G A C T G C G T A A C G T A G T C A G T C G C T A A C T G A T G C C G T A
A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GHDGHGGGATCCHGCD
---GGGGGAATCCCC-
 C T A G G A C T C A G T A C T G G C T A C T A G A C T G A C T G C G T A A C G T A G T C A G T C G C T A A C T G A T G C C G T A
A C G T A C G T A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GHDGHGGGATCCHGCD
-TGGCGGGAAAHB---
 C T A G G A C T C A G T A C T G G C T A C T A G A C T G A C T G C G T A A C G T A G T C A G T C G C T A A C T G A T G C C G T A
A C G T C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T A C G T A C G T