Information for 2-WATYTRCMTTGMR (Motif 3)

C G A T C G T A A C G T A G C T A C G T C T A G A G T C G T C A A C G T A C G T A C T G G T A C C T A G
Reverse Opposite:
A G T C C A T G A G T C C G T A C G T A A C G T A C T G A G T C C G T A C T G A C G T A A C G T C G T A
p-value:1e-10
log p-value:-2.520e+01
Information Content per bp:1.826
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif5.95%
Number of Background Sequences with motif10.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets64.6 +/- 29.9bp
Average Position of motif in Background44.6 +/- 21.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--WATYTRCMTTGMR
BTVATTWGCATA---
 A C G T A C G T C G A T C G T A A C G T A G C T A C G T C T A G A G T C G T C A A C G T A C G T A C T G G T A C C T A G
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--WATYTRCMTTGMR
TTCATTTGCATAT--
 A C G T A C G T C G A T C G T A A C G T A G C T A C G T C T A G A G T C G T C A A C G T A C G T A C T G G T A C C T A G
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--WATYTRCMTTGMR
CTCATTTGCATW---
 A C G T A C G T C G A T C G T A A C G T A G C T A C G T C T A G A G T C G T C A A C G T A C G T A C T G G T A C C T A G
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:WATYTRCMTTGMR
-ATTTGCATA---
 C G A T C G T A A C G T A G C T A C G T C T A G A G T C G T C A A C G T A C G T A C T G G T A C C T A G
A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---WATYTRCMTTGMR
TNTAATTTGCATANNN
 A C G T A C G T A C G T C G A T C G T A A C G T A G C T A C G T C T A G A G T C G T C A A C G T A C G T A C T G G T A C C T A G
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:WATYTRCMTTGMR
-ATTTGCATAA--
 C G A T C G T A A C G T A G C T A C G T C T A G A G T C G T C A A C G T A C G T A C T G G T A C C T A G
A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:WATYTRCMTTGMR
-ATTTGCATAT--
 C G A T C G T A A C G T A G C T A C G T C T A G A G T C G T C A A C G T A C G T A C T G G T A C C T A G
A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---WATYTRCMTTGMR
TNTAATTTGCATACNA
 A C G T A C G T A C G T C G A T C G T A A C G T A G C T A C G T C T A G A G T C G T C A A C G T A C G T A C T G G T A C C T A G
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---WATYTRCMTTGMR
TNTAATTTGCATACNA
 A C G T A C G T A C G T C G A T C G T A A C G T A G C T A C G T C T A G A G T C G T C A A C G T A C G T A C T G G T A C C T A G
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

POU3F4/MA0789.1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:WATYTRCMTTGMR
-ATTTGCATA---
 C G A T C G T A A C G T A G C T A C G T C T A G A G T C G T C A A C G T A C G T A C T G G T A C C T A G
A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T A C G T A C G T