Information for 3-GCTCAAAATA (Motif 11)

A C T G A G T C A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A C G A T A C G T A C G T A C G T C T A G C G T A C T A G G T A C
p-value:1e-7
log p-value:-1.639e+01
Information Content per bp:1.891
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif5.95%
Number of Background Sequences with motif59.3
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets60.7 +/- 28.5bp
Average Position of motif in Background47.0 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:1
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GCTCAAAATA--
GCTAAAAATAGC
 A C T G A G T C A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.78
Offset:0
Orientation:forward strand
Alignment:GCTCAAAATA--
DCYAAAAATAGM
 A C T G A G T C A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:3
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--GCTCAAAATA---
ATGCTAAAAATAGAA
 A C G T A C G T A C T G A G T C A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.77
Offset:1
Orientation:forward strand
Alignment:GCTCAAAATA-
-CCAAAAATAG
 A C T G A G T C A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T
A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

MEF2A/MA0052.3/Jaspar

Match Rank:5
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GCTCAAAATA--
TCTAAAAATAGA
 A C T G A G T C A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:6
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GCTCAAAATA--
KCCAAAAATAGC
 A C T G A G T C A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

MEF2B/MA0660.1/Jaspar

Match Rank:7
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCTCAAAATA--
GCTATAAATAGC
 A C T G A G T C A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

MEF2D/MA0773.1/Jaspar

Match Rank:8
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCTCAAAATA--
ACTATAAATAGA
 A C T G A G T C A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

PB0116.1_Elf3_2/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCTCAAAATA-------
GTTCAAAAAAAAAATTC
 A C T G A G T C A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

LIN54/MA0619.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCTCAAAATA
NATTCAAAT--
 A C G T A C T G A G T C A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T