Information for 7-GTTGTCCTAC (Motif 32)

A C T G A C G T A C G T A C T G A C G T A G T C A G T C A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C T G A C T G C G T A A G T C C G T A C G T A A G T C
p-value:1e-3
log p-value:-7.913e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.88%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets79.0 +/- 0.0bp
Average Position of motif in Background77.8 +/- 10.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA(var.2)/MA0072.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GTTGTCCTAC-----
-TTGACCTANTTATN
 A C T G A C G T A C G T A C T G A C G T A G T C A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

PB0032.1_IRC900814_1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GTTGTCCTAC--
GNNATTTGTCGTAANN
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T A G T C A G T C A C G T C G T A A G T C A C G T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTTGTCCTAC
CCATTGTTNY--
 A C G T A C G T A C T G A C G T A C G T A C T G A C G T A G T C A G T C A C G T C G T A A G T C
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GTTGTCCTAC--
--TGACCTARTT
 A C T G A C G T A C G T A C T G A C G T A G T C A G T C A C G T C G T A A G T C A C G T A C G T
A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:5
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GTTGTCCTAC-
NNANTGGTGGTCTTNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T A G T C A G T C A C G T C G T A A G T C A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTTGTCCTAC
--TGACCT--
 A C T G A C G T A C G T A C T G A C G T A G T C A G T C A C G T C G T A A G T C
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTTGTCCTAC
CCATTGTTTT--
 A C G T A C G T A C T G A C G T A C G T A C T G A C G T A G T C A G T C A C G T C G T A A G T C
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTTGTCCTAC
-GTGACCTT-
 A C T G A C G T A C G T A C T G A C G T A G T C A G T C A C G T C G T A A G T C
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GTTGTCCTAC
--TGACCTYA
 A C T G A C G T A C G T A C T G A C G T A G T C A G T C A C G T C G T A A G T C
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

PB0120.1_Foxj1_2/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GTTGTCCTAC
GTNTTGTTGTGANNT
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T A G T C A G T C A C G T C G T A A G T C
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T