Information for 18-GTGGTACTTTTAAGAG (Motif 44)

A C T G A C G T A C T G A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C G T C G T A A G T C A G T C C G T A A G T C
p-value:1e-3
log p-value:-8.096e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets24.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0068.1_Hoxc13/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GTGGTACTTTTAAGAG----
----NAATTTTACGAGNTNN
 A C T G A C G T A C T G A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:2
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:GTGGTACTTTTAAGAG-
------NTTTTACGAGN
 A C T G A C G T A C T G A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

PH0048.1_Hoxa13/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GTGGTACTTTTAAGAG----
----ANATTTTACGAGNNNN
 A C T G A C G T A C T G A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

Hoxa11/MA0911.1/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GTGGTACTTTTAAGAG-
-----ANTTTTACGACC
 A C T G A C G T A C T G A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:5
Score:0.55
Offset:7
Orientation:forward strand
Alignment:GTGGTACTTTTAAGAG-
-------TTTTATKRGG
 A C T G A C G T A C T G A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:GTGGTACTTTTAAGAG-
-------TTTTATTRGN
 A C T G A C G T A C T G A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GTGGTACTTTTAAGAG
ACTCCAAGTACTTGGAA---
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A A C G T A C G T A C G T

HOXC10/MA0905.1/Jaspar

Match Rank:8
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GTGGTACTTTTAAGAG
------NTTTTACGAC
 A C T G A C G T A C T G A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C

HOXD12/MA0873.1/Jaspar

Match Rank:9
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GTGGTACTTTTAAGAG-
------NTTTTACGACT
 A C T G A C G T A C T G A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T

HOXD11/MA0908.1/Jaspar

Match Rank:10
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GTGGTACTTTTAAGAG
------NTTTTACGAC
 A C T G A C G T A C T G A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C