Information for 22-CTACAAAAAGCAG (Motif 41)

A G T C A C G T C G T A A G T C C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G
p-value:1e-3
log p-value:-8.096e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets71.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2B/MA0660.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CTACAAAAAGCAG
GCTATAAATAGC--
 A C G T A G T C A C G T C G T A A G T C C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C T G
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTACAAAAAGCAG
ACTATAAATAGA--
 A C G T A G T C A C G T C G T A A G T C C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C T G
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTACAAAAAGCAG
TCTAAAAATAGA--
 A C G T A G T C A C G T C G T A A G T C C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C T G
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTACAAAAAGCAG
GCTAAAAATAGC--
 A C G T A G T C A C G T C G T A A G T C C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C T G
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CTACAAAAAGCAG
ATGCTAAAAATAGAA-
 A C G T A C G T A C G T A G T C A C G T C G T A A G T C C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C T G
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTACAAAAAGCAG
DCYAAAAATAGM--
 A C G T A G T C A C G T C G T A A G T C C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C T G
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTACAAAAAGCAG--
GTATAAAAGGCGGGG
 A G T C A C G T C G T A A G T C C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C T G A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTACAAAAAGCAG--
GTATAAAAGGCGGGG
 A G T C A C G T C G T A A G T C C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C T G A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTACAAAAAGCAG
KCCAAAAATAGC--
 A C G T A G T C A C G T C G T A A G T C C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C T G
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTACAAAAAGCAG-
AAACAGACAAAGGAAT
 A C G T A C G T A G T C A C G T C G T A A G T C C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C T G A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T