Information for 18-GAAAGGACACAGT (Motif 38)

A C T G C G T A C G T A C G T A A C T G A C T G C G T A A G T C C G T A A G T C C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A C T G A C G T A C T G A C G T A G T C A G T C A C G T A C G T A C G T A G T C
p-value:1e-3
log p-value:-8.096e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets70.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GAAAGGACACAGT
--AAGGTCAC---
 A C T G C G T A C G T A C G T A A C T G A C T G C G T A A G T C C G T A A G T C C G T A A C T G A C G T
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GAAAGGACACAGT
ANGNAAAGGTCA----
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C T G C G T A A G T C C G T A A G T C C G T A A C T G A C G T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GAAAGGACACAGT
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C T G C G T A A G T C C G T A A G T C C G T A A C T G A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GAAAGGACACAGT
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C T G C G T A A G T C C G T A A G T C C G T A A C T G A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAAAGGACACAGT
-CAAGGHCANV--
 A C T G C G T A C G T A C G T A A C T G A C T G C G T A A G T C C G T A A G T C C G T A A C T G A C G T
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAAAGGACACAGT
GAGAACCGAAACTG-
 A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C T G C G T A A G T C C G T A A G T C C G T A A C T G A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAAAGGACACAGT
-TRAGGTCA----
 A C T G C G T A C G T A C G T A A C T G A C T G C G T A A G T C C G T A A G T C C G T A A C T G A C G T
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAAAGGACACAGT
CAAAGGTCAG---
 A C T G C G T A C G T A C G T A A C T G A C T G C G T A A G T C C G T A A G T C C G T A A C T G A C G T
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAAAGGACACAGT
TCAAGGTCAN---
 A C T G C G T A C G T A C G T A A C T G A C T G C G T A A G T C C G T A A G T C C G T A A C T G A C G T
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAAAGGACACAGT---
CANAGNNCAAAGTCCA
 A C T G C G T A C G T A C G T A A C T G A C T G C G T A A G T C C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A