Information for 17-AAGGCCTATAAAA (Motif 37)

C G T A C G T A A C T G A C T G A G T C A G T C A C G T C G T A A C G T C G T A C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C T G A C T G A G T C A G T C A C G T A C G T
p-value:1e-3
log p-value:-8.096e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13/MA0901.1/Jaspar

Match Rank:1
Score:0.73
Offset:4
Orientation:forward strand
Alignment:AAGGCCTATAAAA-
----CCAATAAAAC
 C G T A C G T A A C T G A C T G A G T C A G T C A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:2
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:AAGGCCTATAAAA
---CCYMATAAAA
 C G T A C G T A A C T G A C T G A G T C A G T C A C G T C G T A A C G T C G T A C G T A C G T A C G T A
A C G T A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

PH0057.1_Hoxb13/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AAGGCCTATAAAA----
-AACCCAATAAAATTCG
 C G T A C G T A A C T G A C T G A G T C A G T C A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

HOXA13/MA0650.1/Jaspar

Match Rank:4
Score:0.70
Offset:4
Orientation:forward strand
Alignment:AAGGCCTATAAAA-
----CCAATAAAAA
 C G T A C G T A A C T G A C T G A G T C A G T C A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

TATA-Box(TBP)/Promoter/Homer

Match Rank:5
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:AAGGCCTATAAAA--
---GNCTATAAAAGG
 C G T A C G T A A C T G A C T G A G T C A G T C A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

HOXD13/MA0909.1/Jaspar

Match Rank:6
Score:0.70
Offset:4
Orientation:forward strand
Alignment:AAGGCCTATAAAA-
----CCAATAAAAA
 C G T A C G T A A C T G A C T G A G T C A G T C A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.70
Offset:3
Orientation:forward strand
Alignment:AAGGCCTATAAAA
---NCYAATAAAA
 C G T A C G T A A C T G A C T G A G T C A G T C A C G T C G T A A C G T C G T A C G T A C G T A C G T A
A C G T A C G T A C G T C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A

PH0078.1_Hoxd13/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AAGGCCTATAAAA----
-CTACCAATAAAATTCT
 C G T A C G T A A C T G A C T G A G T C A G T C A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

POL012.1_TATA-Box/Jaspar

Match Rank:9
Score:0.69
Offset:5
Orientation:forward strand
Alignment:AAGGCCTATAAAA-------
-----GTATAAAAGGCGGGG
 C G T A C G T A A C T G A C T G A G T C A G T C A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:10
Score:0.69
Offset:5
Orientation:forward strand
Alignment:AAGGCCTATAAAA-------
-----GTATAAAAGGCGGGG
 C G T A C G T A A C T G A C T G A G T C A G T C A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G